PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981238.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 357aa MW: 39473.1 Da PI: 7.8691

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.4	9.6e-56	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_022981238.1 15 LPPGFRFHPTDEELITYYLLKKVLDSTFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSA 108 79***********************999.89***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_022981238.1 109 kTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 55677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MDVSSFSHCD DSHHLPPGFR FHPTDEELIT YYLLKKVLDS TFTGRAIAEV DLNKCEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSAKT YSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGNFAYHY LSRTSKDEWV ISRVFQKSGA GSGNGGATSS 180 NGGGSKKARF VPGSINVYPE PSSTSSVSLP PLLDSSLYSA PATISTASGN IPDRDSCSYN 240 SPAAREHVSC FSTTTGGSLN IPNYDFAPPP PLVAADPSTR FHRNIGLSVF PSLRSLQENL 300 QLPFFYTPVN LPSPTTALHH GNISSADVGA CSSAGNWAVS DETRFMNSTE LDCMWSY

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MDVSSFSHCD DSHHLPPGFR FHPTDEELIT YYLLKKVLDS TFTGRAIAEV DLNKCEPWEL  60
PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSAKT YSLVGMKKTL  120
VFYRGRAPKG EKSNWVMHEY RLEGNFAYHY LSRTSKDEWV ISRVFQKSGA GSGNGGATSS  180
NGGGSKKARF VPGSINVYPE PSSTSSVSLP PLLDSSLYSA PATISTASGN IPDRDSCSYN  240
SPAAREHVSC FSTTTGGSLN IPNYDFAPPP PLVAADPSTR FHRNIGLSVF PSLRSLQENL  300
QLPFFYTPVN LPSPTTALHH GNISSADVGA CSSAGNWAVS DETRFMNSTE LDCMWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-109	NAC family protein