PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981133.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 763aa MW: 88113.1 Da PI: 8.1461

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	94	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+ vGF +++++s++skr+g++++ + Cs+ g+++e++++ ++r+ +tgC+a++++kk++dgkw v+ + eHnHe++p XP_022981133.1 94 SFYREYARFVGFGITIKASRRSKRSGKFIDIKIACSRFGSKRESTTT----VKPRPCMKTGCDASIHIKKREDGKWFVHGFIREHNHEICP 180 5**************************************998877....99*********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MDIDLELPSS DQERLGIIES KNDGMDLDQT HGEGRAANSP TRAELSQGMS IPNTETSSVR 60 DQMVIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK 120 FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHGF IREHNHEICP 180 DDFHYALKGK NKNPDIVASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK 240 QLRSVLWVDA KARHDYKDFS DVIFFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD 300 MATSSFIWLM KTWLKAVGGP APSVVLTDRE PFLKEAVADV FPKAIHLFSL WQILTRVREK 360 LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VKENEWLQLL FDDHKKWVPA 420 YVKNYFLAGM CTSDRSGSVA SFFDNYISKE TMFKEFVERS EIFSKDMLEL EADADVETRH 480 QEPALKSLSP FEQQMATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ 540 KFLVAWNKAE LDIHCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYILKR WTRSAKVRLS 600 ESPNRLHYRV VRFNHLCKQA IRLSEVGSLS QETYDIAFDA LEDVLKQCVF VNNSNKSFAE 660 TSMVSVGFVD VEEDDRGEDM AKSSRKKKTI KKGKVSRSPS RHGTNRRRRK SIRERLHSMA 720 AQIRLSVMDL KVIIVFKLCR IWINLLRLKL VLVHVTIDKL FSP

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MDIDLELPSS DQERLGIIES KNDGMDLDQT HGEGRAANSP TRAELSQGMS IPNTETSSVR  60
DQMVIVNVGI NHIMGPAFEP KIGLEFESKE EAYSFYREYA RFVGFGITIK ASRRSKRSGK  120
FIDIKIACSR FGSKRESTTT VKPRPCMKTG CDASIHIKKR EDGKWFVHGF IREHNHEICP  180
DDFHYALKGK NKNPDIVASE KNGLQLALDE GDVHLMLEHF MHMQEMNPNF FYAVDFNQEK  240
QLRSVLWVDA KARHDYKDFS DVIFFDTHYI SSGYQIPFVP IVGVNHHFQY VLFGGALIGD  300
MATSSFIWLM KTWLKAVGGP APSVVLTDRE PFLKEAVADV FPKAIHLFSL WQILTRVREK  360
LGKIIDQNRN FMESFDKCIY GSWRDEEFEK KWWEMVEKFE VKENEWLQLL FDDHKKWVPA  420
YVKNYFLAGM CTSDRSGSVA SFFDNYISKE TMFKEFVERS EIFSKDMLEL EADADVETRH  480
QEPALKSLSP FEQQMATIYV TTIFKKFQLE VVGAASCRVH EQTEDGAIVT YQVDDLEEQQ  540
KFLVAWNKAE LDIHCRCRSF EHRGILCRHA ILVLQVSGVT SIPQKYILKR WTRSAKVRLS  600
ESPNRLHYRV VRFNHLCKQA IRLSEVGSLS QETYDIAFDA LEDVLKQCVF VNNSNKSFAE  660
TSMVSVGFVD VEEDDRGEDM AKSSRKKKTI KKGKVSRSPS RHGTNRRRRK SIRERLHSMA  720
AQIRLSVMDL KVIIVFKLCR IWINLLRLKL VLVHVTIDKL FSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein