PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022980839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SBP | ||||||||
Protein Properties | Length: 387aa MW: 43273.3 Da PI: 7.364 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 9.9e-41 | 146 | 223 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrh+vCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_022980839.1 146 RCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSH 223 6**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MEMEICANLM GHSNPTRDQT PNATNLSCPN NIWDFNSSRF DLDWATANSL CPDTTRSQPM 60 SAHALWLHPH DADARHHQFL YAADHQRAHF HPDPHLMCLK LGKRHYFEDA TAPSVVGGFA 120 TVGKRGKGLY GGDGGPYGPV PTTVPRCQVE GCHVALVNAK DYHRRHRVCE MHSKAPKVVV 180 VGLEQRFCQQ CSRFHVISEF DDSKRSCRRR LAGHNERRRK SSHESVAARN CTQENKSMTG 240 NIAYIPSPTG RALSLLSSKK ETWATTSELS LRSSAALREL IAENRAAILA RQLILDRDWH 300 LNHAATTDDF GGGGVGFHQQ QGLYCEQQQQ QSWEGMNENG GAHVTLDLMQ APSTAFGMLS 360 VRGKSKEEEE ECCELWNSFH DHDSHVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 1e-36 | SBP family protein |