PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980134.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 968aa MW: 106130 Da PI: 5.4266

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.2e-29	589	640	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++s+++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022980134.1 589 AEKNVSFSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 640 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 968 aa Download sequence
MENPFPSKEE GMGYWGPSRT QADALTFTDA GMRIPSPEDV LHSISELMSF DSYAGWGNNC 60 AVMDPVFTSC GISSIPPTST CPSMEGSTFP EGGSHEILTL NELGGASISV VNSFTCGDEV 120 MFQQPDTEFG VSDVSDNTNE SGSNSNNVQD MDSCLISRPI GWSLDERMLR ALSLFKESSP 180 GGILAQVWVP MKHGNQFFLS TTDQPYLLDQ MLTGYREVSR WYTFSAEGKL GSLLGLPGRV 240 FNSKIPEWTS NVRYYSDAEY LRMEHAIGHE VYGSIALPIF SNELERSCCA VLEVVTTKEK 300 PNFDAEIDIV SRALEIVSLR TIAPPRLYPQ CLKQNQRSVL AEITDVLRAV CHAHRLPLAL 360 TWIPCCYTMQ AVDEAARVRV KENDVSPKGK SVLCIEETAC YVNDKATQGF VHACTEHHLE 420 EGQGIVGKAL QSNHPFFYPD VKAYNINEYP LVHHARKFGL NAAVAIRLRS TYTGADDYIL 480 EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKDEL LGAKDPDAGF QSGMVGKSAT 540 TSRRNSQSTV TDSETRVSNS INDGTKAECP KKQTTNGTRR QADKKRSTAE KNVSFSVLQQ 600 YFSGSLKDAA KSIGVCPTTL KRICRQHGIL RWPSRKINKV NRSLGKIQTV LDSVKGVECR 660 LKFDPTTGGL MAAGSLIPEL NGQNSPLFSD NNPSIINLKP LPRDVNSVPS IPFDSQNPTV 720 KLEMDDQRNS SRSVLIPEKE PSVCQLDCGE GSKSTGLDAA SCQLSGLDVM DWDVPGNAAG 780 CITAKKGNGL DFVENNLRSC SFGAANGVGT MWEGSDGMNE HYQPTTSSMT DSSNGSGLLI 840 HGSSSSGQSV EERKHLQEKT SCVDSDSKIV VKASYKEDTV RFKFDPSLGY LQLYEEVGKR 900 FKLNQGTFQL KYLDDEKEWV MLVSNSDMQE CLEVMDEIGT RNVKFLVRDI TCAVGSSGSS 960 SCYLSGGS

Sequence ? help Back to Top

Protein Sequence Length: 968 aa Download sequence

MENPFPSKEE GMGYWGPSRT QADALTFTDA GMRIPSPEDV LHSISELMSF DSYAGWGNNC  60
AVMDPVFTSC GISSIPPTST CPSMEGSTFP EGGSHEILTL NELGGASISV VNSFTCGDEV  120
MFQQPDTEFG VSDVSDNTNE SGSNSNNVQD MDSCLISRPI GWSLDERMLR ALSLFKESSP  180
GGILAQVWVP MKHGNQFFLS TTDQPYLLDQ MLTGYREVSR WYTFSAEGKL GSLLGLPGRV  240
FNSKIPEWTS NVRYYSDAEY LRMEHAIGHE VYGSIALPIF SNELERSCCA VLEVVTTKEK  300
PNFDAEIDIV SRALEIVSLR TIAPPRLYPQ CLKQNQRSVL AEITDVLRAV CHAHRLPLAL  360
TWIPCCYTMQ AVDEAARVRV KENDVSPKGK SVLCIEETAC YVNDKATQGF VHACTEHHLE  420
EGQGIVGKAL QSNHPFFYPD VKAYNINEYP LVHHARKFGL NAAVAIRLRS TYTGADDYIL  480
EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKDEL LGAKDPDAGF QSGMVGKSAT  540
TSRRNSQSTV TDSETRVSNS INDGTKAECP KKQTTNGTRR QADKKRSTAE KNVSFSVLQQ  600
YFSGSLKDAA KSIGVCPTTL KRICRQHGIL RWPSRKINKV NRSLGKIQTV LDSVKGVECR  660
LKFDPTTGGL MAAGSLIPEL NGQNSPLFSD NNPSIINLKP LPRDVNSVPS IPFDSQNPTV  720
KLEMDDQRNS SRSVLIPEKE PSVCQLDCGE GSKSTGLDAA SCQLSGLDVM DWDVPGNAAG  780
CITAKKGNGL DFVENNLRSC SFGAANGVGT MWEGSDGMNE HYQPTTSSMT DSSNGSGLLI  840
HGSSSSGQSV EERKHLQEKT SCVDSDSKIV VKASYKEDTV RFKFDPSLGY LQLYEEVGKR  900
FKLNQGTFQL KYLDDEKEWV MLVSNSDMQE CLEVMDEIGT RNVKFLVRDI TCAVGSSGSS  960
SCYLSGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein