PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980132.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 969aa MW: 106259 Da PI: 5.4266

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93	2.2e-29	590	641	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++s+++l++yFs+++kdAAk++gvc+T+LKriCRq+GI RWP+Rki+++ XP_022980132.1 590 AEKNVSFSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGILRWPSRKINKV 641 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence
MENPFPSKEE GMGYWGPSRT QADALTFTDA GMRIPSPEDV LHSISELMSF DSYAGWGNNC 60 AVMDPVFTSC GISSIPPTST CPSMEGSTFP EGGSHEILTL NELGGASISV VNSFTCGDEV 120 MFQQPDTEFG VSDVSDNTNE SGSNSNNVQD MDSCLISRPI GWSLDERMLR ALSLFKESSP 180 GGILAQVWVP MKHGNQFFLS TTDQPYLLDQ MLTGYREVSR WYTFSAEGKL GSLLGLPGRV 240 FNSKIPEWTS NVRYYSDAEY LRMEHAIGHE VYGSIALPIF SNELERSCCA VLEVVTTKEK 300 PNFDAEIDIV SRALEIVSLR TIAPPRLYPQ CLKQNQRSVL AEITDVLRAV CHAHRLPLAL 360 TWIPCCYTMQ AVDEAARVRV KENDVSPKGK SVLCIEETAC YVNDKATQGF VHACTEHHLE 420 EGQGIVGKAL QSNHPFFYPD VKAYNINEYP LVHHARKFGL NAAVAIRLRS TYTGADDYIL 480 EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKDEL LGAKDPDAGF QSGMVGKSAT 540 TSRRNSQSTV TDSETRVSNS INDGTKAECP KKQQTTNGTR RQADKKRSTA EKNVSFSVLQ 600 QYFSGSLKDA AKSIGVCPTT LKRICRQHGI LRWPSRKINK VNRSLGKIQT VLDSVKGVEC 660 RLKFDPTTGG LMAAGSLIPE LNGQNSPLFS DNNPSIINLK PLPRDVNSVP SIPFDSQNPT 720 VKLEMDDQRN SSRSVLIPEK EPSVCQLDCG EGSKSTGLDA ASCQLSGLDV MDWDVPGNAA 780 GCITAKKGNG LDFVENNLRS CSFGAANGVG TMWEGSDGMN EHYQPTTSSM TDSSNGSGLL 840 IHGSSSSGQS VEERKHLQEK TSCVDSDSKI VVKASYKEDT VRFKFDPSLG YLQLYEEVGK 900 RFKLNQGTFQ LKYLDDEKEW VMLVSNSDMQ ECLEVMDEIG TRNVKFLVRD ITCAVGSSGS 960 SSCYLSGGS

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence

MENPFPSKEE GMGYWGPSRT QADALTFTDA GMRIPSPEDV LHSISELMSF DSYAGWGNNC  60
AVMDPVFTSC GISSIPPTST CPSMEGSTFP EGGSHEILTL NELGGASISV VNSFTCGDEV  120
MFQQPDTEFG VSDVSDNTNE SGSNSNNVQD MDSCLISRPI GWSLDERMLR ALSLFKESSP  180
GGILAQVWVP MKHGNQFFLS TTDQPYLLDQ MLTGYREVSR WYTFSAEGKL GSLLGLPGRV  240
FNSKIPEWTS NVRYYSDAEY LRMEHAIGHE VYGSIALPIF SNELERSCCA VLEVVTTKEK  300
PNFDAEIDIV SRALEIVSLR TIAPPRLYPQ CLKQNQRSVL AEITDVLRAV CHAHRLPLAL  360
TWIPCCYTMQ AVDEAARVRV KENDVSPKGK SVLCIEETAC YVNDKATQGF VHACTEHHLE  420
EGQGIVGKAL QSNHPFFYPD VKAYNINEYP LVHHARKFGL NAAVAIRLRS TYTGADDYIL  480
EFFLPVNMKG SSEQQLLLNN LSGTMQRMCR SLRTVSKDEL LGAKDPDAGF QSGMVGKSAT  540
TSRRNSQSTV TDSETRVSNS INDGTKAECP KKQQTTNGTR RQADKKRSTA EKNVSFSVLQ  600
QYFSGSLKDA AKSIGVCPTT LKRICRQHGI LRWPSRKINK VNRSLGKIQT VLDSVKGVEC  660
RLKFDPTTGG LMAAGSLIPE LNGQNSPLFS DNNPSIINLK PLPRDVNSVP SIPFDSQNPT  720
VKLEMDDQRN SSRSVLIPEK EPSVCQLDCG EGSKSTGLDA ASCQLSGLDV MDWDVPGNAA  780
GCITAKKGNG LDFVENNLRS CSFGAANGVG TMWEGSDGMN EHYQPTTSSM TDSSNGSGLL  840
IHGSSSSGQS VEERKHLQEK TSCVDSDSKI VVKASYKEDT VRFKFDPSLG YLQLYEEVGK  900
RFKLNQGTFQ LKYLDDEKEW VMLVSNSDMQ ECLEVMDEIG TRNVKFLVRD ITCAVGSSGS  960
SSCYLSGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein