PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979146.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 808aa MW: 93882.4 Da PI: 7.9765

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.8	3.3e-27	47	133	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e ++ ++r+ ++++t+Cka+++vk++ dg+w ++++ ++HnHel p XP_022979146.1 47 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPEPENG---NSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHELLP 133 *************************************9998877...7888899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MVDVVAEMHD RDDGIVSLPK DFLFEGDIDL EPRSGIDFES HEAAYTFYQE YAKSMGFTTS 60 IKNSRRSKKS KEFIDAKFAC SRYGVTPEPE NGNSRRPSVK KTDCKASMHV KRRPDGRWII 120 HEFIKDHNHE LLPALAYHFR IHRNVKLAEK NNIDILHAVS ERTRRMYVEM SKKRGVYRNV 180 GFLQIDTTYQ FDKGQYLALD EGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD 240 AKSRNDYVSF NDVVSFDISY IKTNDKLPFA PFIGVNHHGQ SMMLGCALAA DCTKPTFTWL 300 LKTWLRAMGG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHK 360 NFLSKFNKCI LKSWTDEQFD MRWWKMVSRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG 420 MSPAQCSDST NAFFDKYIHK KITLKEFLKQ YGNILQNRYE EEAIADFDTL HKQPALKSPS 480 PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL 540 NSEVSCFCRL FEYNGFLCRH ALIVLHMHRF SNIPPQYLLK RWTKDAKSRQ ANTTEGTEFR 600 QNRVQRYNNL CKKAIELSEE GSQSEECYNI AIRTVVEALK NCVNINNSKS APAESSVNDY 660 GLREEVENQE SIAAKANKRS MNRKRKVQTE TDMILVESQN NLQQMDGLTS DSMTLSGYYG 720 SQQNVQGLVQ LNLMEPPRDA SYYVNQQSIQ GLGQLNTIAA SHDGSFGAQH NGIHALVDYR 780 PATSYSYSLQ DEQHLRSAQL HGSTSRHT

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MVDVVAEMHD RDDGIVSLPK DFLFEGDIDL EPRSGIDFES HEAAYTFYQE YAKSMGFTTS  60
IKNSRRSKKS KEFIDAKFAC SRYGVTPEPE NGNSRRPSVK KTDCKASMHV KRRPDGRWII  120
HEFIKDHNHE LLPALAYHFR IHRNVKLAEK NNIDILHAVS ERTRRMYVEM SKKRGVYRNV  180
GFLQIDTTYQ FDKGQYLALD EGDAQVLLEY FKRIQKENPY FFYAIDLNEE QRLRNLFWVD  240
AKSRNDYVSF NDVVSFDISY IKTNDKLPFA PFIGVNHHGQ SMMLGCALAA DCTKPTFTWL  300
LKTWLRAMGG QAPKVIITDQ DKALKLAIEE VFPNTRHCFA LWHIMEKIPE TLAHVIKRHK  360
NFLSKFNKCI LKSWTDEQFD MRWWKMVSRF ELQDDKWIQS LYDDRRKWVP TYMEEIFLAG  420
MSPAQCSDST NAFFDKYIHK KITLKEFLKQ YGNILQNRYE EEAIADFDTL HKQPALKSPS  480
PWEKQMSTIY THTIFKKFQV EVLGVVGCHP RKESEDGGIT TFRVLDCEKD EHFLVKWHEL  540
NSEVSCFCRL FEYNGFLCRH ALIVLHMHRF SNIPPQYLLK RWTKDAKSRQ ANTTEGTEFR  600
QNRVQRYNNL CKKAIELSEE GSQSEECYNI AIRTVVEALK NCVNINNSKS APAESSVNDY  660
GLREEVENQE SIAAKANKRS MNRKRKVQTE TDMILVESQN NLQQMDGLTS DSMTLSGYYG  720
SQQNVQGLVQ LNLMEPPRDA SYYVNQQSIQ GLGQLNTIAA SHDGSFGAQH NGIHALVDYR  780
PATSYSYSLQ DEQHLRSAQL HGSTSRHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein