PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978726.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 356aa MW: 39204.6 Da PI: 8.0288

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.5	8.4e-17	50	110	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++ ++++ +l ++ +++V++WFqNr+ + k+ XP_022978726.1 50 KPRWNPKPEQIRILEAIFNSgMVNPPRDXIRKIRGQLqeygQVGDANVFYWFQNRKSRSKN 110 89***************99***********************************995 PP
2	Wus_type_Homeobox	108.6	3.6e-35	49	111	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ i++i+ +L+eyG+++d+NVfyWFQNrk+R+++k XP_022978726.1 49 PKPRWNPKPEQIRILEAIFNSGMVNPPRDXIRKIRGQLQEYGQVGDANVFYWFQNRKSRSKNK 111 579**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MASSNSHWPS MFKSKPCNSH HQWQHDINCL RSAPYNTVVG GYEEKSPDPK PRWNPKPEQI 60 RILEAIFNSG MVNPPRDXIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLQNSKS 120 NHNSPTTTTT TTAPTTTTTK TTTLSPTAAN PAATCSSSSS SDKSSPKISP MKSFTSNSVS 180 QNYLQQPTNE LLPESFFFPM PQTGDGGGVI SNLGQGFCFS ELCSVVQHVP DHGFESCTNL 240 LLSESEPFKK DLMKSQPQPQ FMNYHPYLNI STDQSLPQTT ISTAIPQGVG EVCGVGGKST 300 VFINGVAFEV GCGPFNVREA FGDDAVLIHS TGQPVLTNDW GLTLHSLQHG AYYYLI

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MASSNSHWPS MFKSKPCNSH HQWQHDINCL RSAPYNTVVG GYEEKSPDPK PRWNPKPEQI  60
RILEAIFNSG MVNPPRDXIR KIRGQLQEYG QVGDANVFYW FQNRKSRSKN KLRHLQNSKS  120
NHNSPTTTTT TTAPTTTTTK TTTLSPTAAN PAATCSSSSS SDKSSPKISP MKSFTSNSVS  180
QNYLQQPTNE LLPESFFFPM PQTGDGGGVI SNLGQGFCFS ELCSVVQHVP DHGFESCTNL  240
LLSESEPFKK DLMKSQPQPQ FMNYHPYLNI STDQSLPQTT ISTAIPQGVG EVCGVGGKST  300
VFINGVAFEV GCGPFNVREA FGDDAVLIHS TGQPVLTNDW GLTLHSLQHG AYYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	3e-56	WOX family protein