PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HB-other | ||||||||
Protein Properties | Length: 1764aa MW: 199945 Da PI: 4.8122 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.5 | 5.3e-19 | 31 | 86 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022978628.1 31 PKRQMKTPFQLETLEKAYALDTYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 69****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1764 aa Download sequence |
MEAAASDGEN HNHNNDDINK ISNSREGLSK PKRQMKTPFQ LETLEKAYAL DTYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRKVMAPAL PDSPIDELRV VAEPGSDYAS 120 GSGSGSSPFG DVGLRNVVPR SVGDDMPMMR RYYEPSRSVM ELRAIACVES QLGEPLREDG 180 PILGIEFDSL PPDAFGAPIV AEQQKRSGHS YGEKYEQRDA KSNKVTARGF TEYPFMPDQS 240 NIRADAYGPV AQSHYPDSLV EVTSARTPYF LGHEQPNRSH NYHGQVSRVR LLSQQEKQAV 300 TIPSPAEDST CVPPRDSFAS IRMNSQFTEH PIVGQENYVL ADGHIFPEDV MIRMERKRKS 360 EEARLNKEAE AHEIKMRKEL EKQDILRKKS EERMRREMER QDRERRREEE KLLREKQREE 420 ERLKREERRE HERKEKFLQR EYLRAEKRRQ KEAIRKEKEA VRRQAAIEKA TARRIARESM 480 ELIEDEQLEL MELAAANKGF SSILSLDHDT LQNLESFQDY LGAFPPKSVQ LKKPFGIQPW 540 INSEENIGNL LMVWRFFITF SDVLELWPFT LDEFVQALHD YDSRLLGEIH ICLLSLIVKD 600 IEDVARTPSA GLGINQNGVA NSGGGHPQIV EGAYAWGFDI CNWQKHLNPL TWPEIFRQLA 660 LSAGFGPQLK KRGLAWSEMR SNDEAKCGED VVSTLRNGSA AENAFAIMQE KGLLAPRRSR 720 HRLTPGTVKF AAFHVLSLEG SEGLTVLELA EKIQRSGLRD LSTSKTPEAS ISVALTRDTK 780 LFERIAPSTY RVRAPYRKDP DDAEEILSVA RKKIQVFQNG FLVGEDADDV ERDEESECDD 840 VDEDPEVDDM ATTALVNEDV SKGDANLGVD NENVCHDIAG NLQNAVAKDI PSFPLSGSKD 900 TKYLNIPTAQ YAAIDETNIS DLDQDNMEID ESKEGESWIQ GLTEGEYHDL SVEERLNALI 960 ALTSIANEGN SIRLVLEDRL EAANAVKKQM LAEAQIDKSR LKEEIITKSD FPIHIVSKVE 1020 TEHNGSAMEG GQSPFPVTEK KNDETTPSTV EILGNVSNER ATSVPDLFPG SDNFLAQQCG 1080 HASKRSRSQL KSYIAHKAEE MYTYRSLPLG RDRRHNRYWQ FVASSSSNDP GSGRIFVEMY 1140 DGKWRLIDSE EDFDALSMAL DTRGVRESHL RIMLQMIETS FKENVRRSPQ CANVMVQSGI 1200 APKHENDELS SSPDCNTGFN SPGSTVCGLN LDTVVTSSSF RIELGRHENE KKAAFRRYQD 1260 LQRWMLRECF STSTLCAMKF GEKRCISLLD ICDSCLCLFE SQHSHCPSCH QTFGTSENDI 1320 NFLEHKRHCE MERMSNPLDV HMLDASLPLK SRLLKALLAF IEVHVPLEAF QSFWTEHRKD 1380 WGVRMKLSPS IEELLQILTL FESAVKRDFL KSDFTTTDEH RGSCSVSGTV MHDPSDIGSV 1440 PTLPWIPRTS AAVALRLCEV DASIYYIGCE KPEPDQDKEV GEHMNFSNRY VQVKNEERTK 1500 LNDLDYDDLM KNENSANPKG FRTSYKRSRG SRDYGRRKKW QKKVNGSRSG QVRQNVKSNE 1560 KMNQGQRELG QGTQVMGIRG RRTVRKRRAE KSIPDDGLLG LMPGSSTHNI DESPKDYLGE 1620 WEDEKMDRFM DMEDEEENVM EDKENVMEDE ENEENVNNNV EAMESEEDGQ GVVGYEEGGW 1680 EFGFEGTSNS NSRWNNGDLE MGSDEDVDLS EDYNGTEEGG NDDIEEELDV DDTSEESDCS 1740 PNRRIVGNNN GGAESAVSDD DYSE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 87 | RRLKDKKE |
2 | 448 | 464 | RRQKEAIRKEKEAVRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |