PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 529aa MW: 55943.7 Da PI: 8.5358 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.1 | 1.5e-05 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022978462.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0012 | 132 | 154 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022978462.1 132 WKCDKCSKKYAVQSDWKAHSKIC 154 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MPADEKDSSM ASGKASVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL FATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRTSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFSWR DSFIRHRAFC 180 DALAKESSKA QPMPVDKPDL HSDHDGDSQS ASVKPNLEPS PPPPPPPPPP SSPPVSSPPQ 240 TGELITALPV PSQELSENPS QCTEEATSTP GLSRSSSSSS SNNKSASSNS SSRSSGFAGL 300 FASSMTSRSL QPPRPPGFTD LMQAMACSDR SSDYASSSTI EPTSLGLAMN QGPSIFGTAS 360 QDLRQYTPMP QPAMSATALL QKAAQIGATA SNASLLRGLG LVSSPSSLAA QQENLPWNHQ 420 SHGQPDGISI AAGLGLGRPC DGNSGLKELM IGNHSMFAPK HTTLDFLGLG MAADGSPNSG 480 LAALITSVGS SVDIGVTTLS YGGSSVDVGV TTLSYSGSGD ISEKKTESE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-103 | C2H2 family protein |