PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 583aa MW: 67425.8 Da PI: 6.2435 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67.6 | 3.2e-21 | 68 | 159 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022978328.1 68 EYYGNFARRNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPARKKPIGENHRDRKSVRCGCDAKMYLSKEVsegVAQWFVVQFSNVHNHELL 159 59********************8888.*******************************************98766789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 583 aa Download sequence |
MASIPSKNVW IRRQQCPCGD WKCYVSYEGE GEETSIAAEL VKSERVSSEA MVSPYVGMVF 60 KSDTEAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAR KKPIGENHRD 120 RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQER DALLNEKREI 240 DTIELLEACK ATKESDEEFV YDFTVDANDR VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS 300 ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTF PQTILTDLDP 360 GLRDAIRSEL PGTKHIISRW NILSKISSWF SFYLGPRYAE FKSEFDLLYS VESSEDFEIR 420 WDQMVSMFGI VSDKHLDLLF SFREYWVPLY IRGCLLAQMA TSAYFKAVDM FLKGVFSAQT 480 CLRSFFEQVG ISANFQSHEH HEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY 540 AASEMADGSY LMHHFKKIDG ERFVMWIEDS EQIHCSYGGG KAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |