PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978327.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 692aa MW: 80367.4 Da PI: 6.3385

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.1e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022978327.1 68 EYYGNFARRNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPARKKPIGENHRDRKSVRCGCDAKMYLSKEVsegVAQWFVVQFSNVHNHELL 159 59******************8888.***************************************98766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MASIPSKNVW IRRQQCPCGD WKCYVSYEGE GEETSIAAEL VKSERVSSEA MVSPYVGMVF 60 KSDTEAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAR KKPIGENHRD 120 RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQER DALLNEKREI 240 DTIELLEACK ATKESDEEFV YDFTVDANDR VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS 300 ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTF PQTILTDLDP 360 GLRDAIRSEL PGTKHIISRW NILSKISSWF SFYLGPRYAE FKSEFDLLYS VESSEDFEIR 420 WDQMVSMFGI VSDKHLDLLF SFREYWVPLY IRGCLLAQMA TSAYFKAVDM FLKGVFSAQT 480 CLRSFFEQVG ISANFQSHEH HEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY 540 AASEMADGSY LMHHFKKIDG ERFVMWIEDS EQIHCSCKEF ESSGMLCRHA LRIFIIKNYF 600 QLPDKYYLSR WRRESSLALS DGHGIESNGG HWFHEYQRLT EALFAESSIT KERSEHVRRE 660 LMKEITRLLN EIRRMPESDG VAAMDLTESP NG

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MASIPSKNVW IRRQQCPCGD WKCYVSYEGE GEETSIAAEL VKSERVSSEA MVSPYVGMVF  60
KSDTEAFEYY GNFARRNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAR KKPIGENHRD  120
RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQER DALLNEKREI  240
DTIELLEACK ATKESDEEFV YDFTVDANDR VEHVAWSYGD SVNAYDMFGD VVYFDTTYSS  300
ITYGLLLGVW LGIDNHGRTI FFGCVLLQDE TPRSLAWAFQ TFIRFMRGTF PQTILTDLDP  360
GLRDAIRSEL PGTKHIISRW NILSKISSWF SFYLGPRYAE FKSEFDLLYS VESSEDFEIR  420
WDQMVSMFGI VSDKHLDLLF SFREYWVPLY IRGCLLAQMA TSAYFKAVDM FLKGVFSAQT  480
CLRSFFEQVG ISANFQSHEH HEMQYLQLKT NIPIEEHARS ILTPFAFNAL QHELVLAMQY  540
AASEMADGSY LMHHFKKIDG ERFVMWIEDS EQIHCSCKEF ESSGMLCRHA LRIFIIKNYF  600
QLPDKYYLSR WRRESSLALS DGHGIESNGG HWFHEYQRLT EALFAESSIT KERSEHVRRE  660
LMKEITRLLN EIRRMPESDG VAAMDLTESP NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein