PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022978267.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Trihelix | ||||||||
Protein Properties | Length: 257aa MW: 31189.6 Da PI: 10.4235 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 70.7 | 2.7e-22 | 36 | 117 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+ e+++L+++r +++r+++ k++ lW +v+ +m+++gf+r+ +qCk+kw+nl +ryk +++++ k +++ +p++d+l+ XP_022978267.1 36 WSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGNMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA---RKQPFPFYDDLH 117 ********************************************************************96...34469****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MENCDRRAFL HRRTNRIGVN AEAAAAAAAE DRFPAWSVPE TKELLAIRAA LDRRFSEMKQ 60 NRMLWISVAG NMKAKGFNRN DEQCKCKWKN LVTRYKGCET MDPKARKQPF PFYDDLHTIF 120 TARMQKNWWI EPKNRAKDSK RKATTERLSS EDMNEEEAKR GKRRREEDER SNLKEIMKGF 180 VEREKEMERQ WREAFRVREE ERRLKEKEWR MKMEGLEREK MMTWIMWREK EDERREREEA 240 RALNTHAFIS ALLRSFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01380.1 | 1e-39 | Trihelix family protein |