PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977908.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 555aa MW: 61453.4 Da PI: 8.7048

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22	5.3e-07	394	477	8	87
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 k+ GF +++++s ng+ + f C ++g+ ++ +k ++ +r+ + ++++gC lk +k + dg w+v+ + HnH XP_022977908.1 394 KRNGFVIVIKTSDAG-VNGRRPRISFGCERSGSYRRLSKLevleDKGARKLTGTKKCGCPFLLKGQKLTtDGDWMVKVVCGVHNH 477 789*****99887.888899******99888777788777788888999999999999888878************* PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MVAVQPVMLV IDESCCQWYS KLRNNDIPSL RWQVLIGSHL TGYDKTRGAL TSEELKKYHV 60 VSLPLDFLHA PEDAALICFT SGTTGRPKGV AITHSALIVQ TLAKVANVGY SEDDVYLHTA 120 PLCHIGGLSS AIAMLMLGAR HILIPKFEVK SAVEAIDLYG VTSLITVPAM MADLVSLIRE 180 RDNGKRRESV KKILNGGGGL PLELIKDAMK FFPRAKLVSA YGMTETCSSL TFLMLCDPTG 240 ETSIPHFQSY AQSKCHSIYQ PEGVCVGKPA PHVEMKICLD DSSHVGRILT RGLNLMLRYY 300 DKISPRPSND VNEVWFDTGD IGSIDDNGNL WLVGRSNGRI KSGGENIYPE EGHSSTSYTN 360 IDSSCEVDYS NEFTTNEIFK SREALINWTR EVGKRNGFVI VIKTSDAGVN GRRPRISFGC 420 ERSGSYRRLS KLEVLEDKGA RKLTGTKKCG CPFLLKGQKL TTDGDWMVKV VCGVHNHVAN 480 KNMEGHSFAG RLSQEENEIL MNLSNSSVRP KDILSTLKSR DARNASTMKT IYNARHRQKR 540 VENKQKPDMQ QLFGG

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MVAVQPVMLV IDESCCQWYS KLRNNDIPSL RWQVLIGSHL TGYDKTRGAL TSEELKKYHV  60
VSLPLDFLHA PEDAALICFT SGTTGRPKGV AITHSALIVQ TLAKVANVGY SEDDVYLHTA  120
PLCHIGGLSS AIAMLMLGAR HILIPKFEVK SAVEAIDLYG VTSLITVPAM MADLVSLIRE  180
RDNGKRRESV KKILNGGGGL PLELIKDAMK FFPRAKLVSA YGMTETCSSL TFLMLCDPTG  240
ETSIPHFQSY AQSKCHSIYQ PEGVCVGKPA PHVEMKICLD DSSHVGRILT RGLNLMLRYY  300
DKISPRPSND VNEVWFDTGD IGSIDDNGNL WLVGRSNGRI KSGGENIYPE EGHSSTSYTN  360
IDSSCEVDYS NEFTTNEIFK SREALINWTR EVGKRNGFVI VIKTSDAGVN GRRPRISFGC  420
ERSGSYRRLS KLEVLEDKGA RKLTGTKKCG CPFLLKGQKL TTDGDWMVKV VCGVHNHVAN  480
KNMEGHSFAG RLSQEENEIL MNLSNSSVRP KDILSTLKSR DARNASTMKT IYNARHRQKR  540
VENKQKPDMQ QLFGG