PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977907.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 628aa MW: 69339.9 Da PI: 9.0097

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.4e-07	467	550	8	87
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 k+ GF +++++s ng+ + f C ++g+ ++ +k ++ +r+ + ++++gC lk +k + dg w+v+ + HnH XP_022977907.1 467 KRNGFVIVIKTSDAG-VNGRRPRISFGCERSGSYRRLSKLevleDKGARKLTGTKKCGCPFLLKGQKLTtDGDWMVKVVCGVHNH 550 789*****99887.888899******99888777788777788888999999999999888878************* PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MTNYSHSHIC QCLSRIATAH RASPLTITGN RRQTGEQFVN SVLALARGLL DLGLLPGDVV 60 VISASNSDWY LEWLLAVAFV GGIAAPLNYR WSFEEAISAM VAVQPVMLVI DESCCQWYSK 120 LRNNDIPSLR WQVLIGSHLT GYDKTRGALT SEELKKYHVV SLPLDFLHAP EDAALICFTS 180 GTTGRPKGVA ITHSALIVQT LAKVANVGYS EDDVYLHTAP LCHIGGLSSA IAMLMLGARH 240 ILIPKFEVKS AVEAIDLYGV TSLITVPAMM ADLVSLIRER DNGKRRESVK KILNGGGGLP 300 LELIKDAMKF FPRAKLVSAY GMTETCSSLT FLMLCDPTGE TSIPHFQSYA QSKCHSIYQP 360 EGVCVGKPAP HVEMKICLDD SSHVGRILTR GLNLMLRYYD KISPRPSNDV NEVWFDTGDI 420 GSIDDNGNLW LVGRSNGRIK SGGENIYPEE IFKSREALIN WTREVGKRNG FVIVIKTSDA 480 GVNGRRPRIS FGCERSGSYR RLSKLEVLED KGARKLTGTK KCGCPFLLKG QKLTTDGDWM 540 VKVVCGVHNH VANKNMEGHS FAGRLSQEEN EILMNLSNSS VRPKDILSTL KSRDARNAST 600 MKTIYNARHR QKRVENKQKP DMQQLFGG

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MTNYSHSHIC QCLSRIATAH RASPLTITGN RRQTGEQFVN SVLALARGLL DLGLLPGDVV  60
VISASNSDWY LEWLLAVAFV GGIAAPLNYR WSFEEAISAM VAVQPVMLVI DESCCQWYSK  120
LRNNDIPSLR WQVLIGSHLT GYDKTRGALT SEELKKYHVV SLPLDFLHAP EDAALICFTS  180
GTTGRPKGVA ITHSALIVQT LAKVANVGYS EDDVYLHTAP LCHIGGLSSA IAMLMLGARH  240
ILIPKFEVKS AVEAIDLYGV TSLITVPAMM ADLVSLIRER DNGKRRESVK KILNGGGGLP  300
LELIKDAMKF FPRAKLVSAY GMTETCSSLT FLMLCDPTGE TSIPHFQSYA QSKCHSIYQP  360
EGVCVGKPAP HVEMKICLDD SSHVGRILTR GLNLMLRYYD KISPRPSNDV NEVWFDTGDI  420
GSIDDNGNLW LVGRSNGRIK SGGENIYPEE IFKSREALIN WTREVGKRNG FVIVIKTSDA  480
GVNGRRPRIS FGCERSGSYR RLSKLEVLED KGARKLTGTK KCGCPFLLKG QKLTTDGDWM  540
VKVVCGVHNH VANKNMEGHS FAGRLSQEEN EILMNLSNSS VRPKDILSTL KSRDARNAST  600
MKTIYNARHR QKRVENKQKP DMQQLFGG