PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977906.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 654aa MW: 72209.7 Da PI: 8.508

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.8e-07	493	576	8	87
FAR1 8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 k+ GF +++++s ng+ + f C ++g+ ++ +k ++ +r+ + ++++gC lk +k + dg w+v+ + HnH XP_022977906.1 493 KRNGFVIVIKTSDAG-VNGRRPRISFGCERSGSYRRLSKLevleDKGARKLTGTKKCGCPFLLKGQKLTtDGDWMVKVVCGVHNH 576 789*****99887.888899******99888777788777788888999999999999888878************* PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MTNYSHSHIC QCLSRIATAH RASPLTITGN RRQTGEQFVN SVLALARGLL DLGLLPGDVV 60 VISASNSDWY LEWLLAVAFV GGIAAPLNYR WSFEEAISAM VAVQPVMLVI DESCCQWYSK 120 LRNNDIPSLR WQVLIGSHLT GYDKTRGALT SEELKKYHVV SLPLDFLHAP EDAALICFTS 180 GTTGRPKGVA ITHSALIVQT LAKVANVGYS EDDVYLHTAP LCHIGGLSSA IAMLMLGARH 240 ILIPKFEVKS AVEAIDLYGV TSLITVPAMM ADLVSLIRER DNGKRRESVK KILNGGGGLP 300 LELIKDAMKF FPRAKLVSAY GMTETCSSLT FLMLCDPTGE TSIPHFQSYA QSKCHSIYQP 360 EGVCVGKPAP HVEMKICLDD SSHVGRILTR GLNLMLRYYD KISPRPSNDV NEVWFDTGDI 420 GSIDDNGNLW LVGRSNGRIK SGGENIYPEE GHSSTSYTNI DSSCEVDYSN EFTTNEIFKS 480 REALINWTRE VGKRNGFVIV IKTSDAGVNG RRPRISFGCE RSGSYRRLSK LEVLEDKGAR 540 KLTGTKKCGC PFLLKGQKLT TDGDWMVKVV CGVHNHVANK NMEGHSFAGR LSQEENEILM 600 NLSNSSVRPK DILSTLKSRD ARNASTMKTI YNARHRQKRV ENKQKPDMQQ LFGG

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MTNYSHSHIC QCLSRIATAH RASPLTITGN RRQTGEQFVN SVLALARGLL DLGLLPGDVV  60
VISASNSDWY LEWLLAVAFV GGIAAPLNYR WSFEEAISAM VAVQPVMLVI DESCCQWYSK  120
LRNNDIPSLR WQVLIGSHLT GYDKTRGALT SEELKKYHVV SLPLDFLHAP EDAALICFTS  180
GTTGRPKGVA ITHSALIVQT LAKVANVGYS EDDVYLHTAP LCHIGGLSSA IAMLMLGARH  240
ILIPKFEVKS AVEAIDLYGV TSLITVPAMM ADLVSLIRER DNGKRRESVK KILNGGGGLP  300
LELIKDAMKF FPRAKLVSAY GMTETCSSLT FLMLCDPTGE TSIPHFQSYA QSKCHSIYQP  360
EGVCVGKPAP HVEMKICLDD SSHVGRILTR GLNLMLRYYD KISPRPSNDV NEVWFDTGDI  420
GSIDDNGNLW LVGRSNGRIK SGGENIYPEE GHSSTSYTNI DSSCEVDYSN EFTTNEIFKS  480
REALINWTRE VGKRNGFVIV IKTSDAGVNG RRPRISFGCE RSGSYRRLSK LEVLEDKGAR  540
KLTGTKKCGC PFLLKGQKLT TDGDWMVKVV CGVHNHVANK NMEGHSFAGR LSQEENEILM  600
NLSNSSVRPK DILSTLKSRD ARNASTMKTI YNARHRQKRV ENKQKPDMQQ LFGG