PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022977320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 157aa MW: 18365 Da PI: 10.6747 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85.8 | 3.9e-27 | 35 | 84 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + i l+dl+kyF+ pi++A+++L+v+lTvLKr+CR++GI+RWPhRkiks+ XP_022977320.1 35 AGIALSDLAKYFDVPITEASRSLNVGLTVLKRRCREFGIHRWPHRKIKSI 84 6799********************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 157 aa Download sequence |
MSSGFSTEFP NVADPMHDSY LSSEKKRRAT SEHIAGIALS DLAKYFDVPI TEASRSLNVG 60 LTVLKRRCRE FGIHRWPHRK IKSIDGLIRD LQEEAKRREE DQKALMAVTK RQMMLQNERE 120 SIERTPFREL ESETKRFRQD VFKRRHKARA LVSHSPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35590.1 | 2e-46 | Nin-like family protein |