PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977272.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 522aa    MW: 58112.6 Da    PI: 6.1582
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS304.91.9e-931245192373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPilkf 93 
                     ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl++ f++AL +r a+    ++ +++++s+ s++ ++++++ + l  f++++P+++f
  XP_022977272.1 124 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRAANtGNCKILASITTSAFSSSLTTHTFSLMDLaaFVDLTPWHRF 218
                     79****************************************************4445677777777777766665555555567********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvl.. 181
                     ++ +aN aIl+a++g ++vH++Df++++++Q p+L++a+a+R e pp l++T+v++++ +      + ++ e+g +L +fA++ +v++ef+v+  
  XP_022977272.1 219 GFTAANAAILDAIDGYSAVHVVDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVAAAAVKdappmLELSYDELGAKLVNFARSRNVSMEFRVVps 313
                     *******************************************************9887788877788899*********************999 PP

            GRAS 182 .vakrledleleeLrvkp.......gEalaVnlvlqlhrll............desvsles.erdevLklvkslsPkvvvvveqeadhnsesFle 255
                      +++ +++l +e++rv++       + al+ n+++ lh+++            d    ++s  r+ +Lk+++sl P++v++ve++ad +s++++ 
  XP_022977272.1 314 cHTDGFANL-IEQIRVQHliygpenNGALVFNCHMLLHYIPeetlnpnpspsfD----MSSsVRSMFLKTIRSLDPTIVILVEEDADFTSTELVS 403
                     844444444.55555555555558799**************5555555533222....3334678****************************** PP

            GRAS 256 rflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                     r+ +a++y +  +ds+++ lpr s++r ++E+  + ++i+nv+a+eg +r+er e +++W +r+++a F+ +p++++a++++k++l +++  g+ 
  XP_022977272.1 404 RLRSAFNYLWIPYDSMDSFLPRSSKQREWYEAD-ICWKIENVIAHEGIQRVERLEPKGRWVQRMRNAKFRGAPFGDEAVSEVKTMLDEHA-AGWG 496
                     *********************************.********************************************************.999* PP

            GRAS 351 veeesgslvlgWkdrpLvsvSaW 373
                     +++e++ lvl+Wk++ +v+++aW
  XP_022977272.1 497 LKKEDDHLVLTWKGHDVVFATAW 519
                     *********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
SSLLSVNFPL PEVPSPPPPP PPPPPPPPLV VSFSLLSVSE FPPFSFPFWL YLPFLSSLHD  60
AIQAHTPRFH HTILNSFPDI SMSNKTQITT TSGQQLRRRP WPGLLFPCSS KALGTCFGDA  120
NCMEQLLVHC ANAIESNDAT LAQQILWVLN NIAPPDGDSN QRLTSAFLRA LVTRAANTGN  180
CKILASITTS AFSSSLTTHT FSLMDLAAFV DLTPWHRFGF TAANAAILDA IDGYSAVHVV  240
DFSLMHCMQI PTLIDAIATR FEVPPLLKLT TVAAAAVKDA PPMLELSYDE LGAKLVNFAR  300
SRNVSMEFRV VPSCHTDGFA NLIEQIRVQH LIYGPENNGA LVFNCHMLLH YIPEETLNPN  360
PSPSFDMSSS VRSMFLKTIR SLDPTIVILV EEDADFTSTE LVSRLRSAFN YLWIPYDSMD  420
SFLPRSSKQR EWYEADICWK IENVIAHEGI QRVERLEPKG RWVQRMRNAK FRGAPFGDEA  480
VSEVKTMLDE HAAGWGLKKE DDHLVLTWKG HDVVFATAWV PC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-162GRAS family protein