PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976954.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1042aa MW: 117632 Da PI: 6.9211

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.6	3.7e-12	6	55	7	56
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 t++ql +L +++ +++yp++++ + A+ lgLt rqV+ WF +R +++ XP_022976954.1 6 KTPQQLLALDAFYSEEKYPTQSRLKTYAATLGLTYRQVQGWFAQKRRRDR 55 699*******************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1042 aa Download sequence
MEFRRKTPQQ LLALDAFYSE EKYPTQSRLK TYAATLGLTY RQVQGWFAQK RRRDRSEDET 60 TVSSTGEWLQ ENQRETKVRK VSKQTSSVPV DCCGKMAAPF KTHGIGKGLM TVWQATNPDA 120 GKFPAGINFS GRELMDASSV STSSSEESLR QGKRPPRQAK VKGRQASKVQ GKRKPSTKNR 180 RVERNGEKSQ KQFCYKKCEL AWERKKSQGC VDQFATLVDD EELELRELQA GKHIMASCDH 240 FMANDVNSCS LCKDMLAKFP PNSVKMKQPF GIQSWDSSLD IGKKLFKAFN FLYTYAITLG 300 ICPFTLDEFA QAFYDKNSFL LGKIHMALLK LLFCDIEAEF SNAYLTPLSK SCKFLALVHL 360 LGSQDFALDV WKKSLNPLTW TEILRQVLIA AGFCSKQGAL QKETLSKEMN LMVKYGLQRG 420 TLKGELFIIL SEQGNNGIKV SDLTRESKIV DLNVAGTTEE LELLICSTLS SDITLFEKIS 480 SSAYRVRPSP ATMDVDEIQS DTDFGSVDDI AANASICSSS YDSECDSENL CSQITKIRKS 540 NNENPTVFME IDVSHPGEAW LLGLMEDEYS GLSIEEKLNA LVALIDLLSY GSSIKPKGTS 600 TSCAIDYASD IRRYGSGAKI KKSSVRGHNL SRSFLTSSGQ LHGASIRHAS LEHHPIDSTT 660 TISEFHENLV GQGNGANKMG DVIYLHPMQS IFLGSDRRYN RYWLFLGPCN ASDPGHRRVY 720 FESSEDGHWE VIDTEEALCA LLSVLDDRGK REAYLIESLE KRVAFLCEAM SNYSTRNLVS 780 RSFTQSEQSD MDRIRESSYS PVSDVDNSLN QAETTGDMLP SCSAIVLDVK RKGEEEKQSW 840 NCLQEFDSWV WNFFYHALYA VRHGKRSYLD SLARCESCHD LYWRDEKHCK VCHMTFELDF 900 NLEERYTIHR ATCREKEDDD VFPKHKVLSS QFQSLKAAVH AIESVMPEGA MVGAWTKSAH 960 KLWIKRLRRT SSLTELLQVV ADFVGAINED WFYNFPEGSS VDFRDTLASF TSLPQTTSAL 1020 AFWLVKLDAF LNCFLWKDLK GS

Sequence ? help Back to Top

Protein Sequence Length: 1042 aa Download sequence

MEFRRKTPQQ LLALDAFYSE EKYPTQSRLK TYAATLGLTY RQVQGWFAQK RRRDRSEDET  60
TVSSTGEWLQ ENQRETKVRK VSKQTSSVPV DCCGKMAAPF KTHGIGKGLM TVWQATNPDA  120
GKFPAGINFS GRELMDASSV STSSSEESLR QGKRPPRQAK VKGRQASKVQ GKRKPSTKNR  180
RVERNGEKSQ KQFCYKKCEL AWERKKSQGC VDQFATLVDD EELELRELQA GKHIMASCDH  240
FMANDVNSCS LCKDMLAKFP PNSVKMKQPF GIQSWDSSLD IGKKLFKAFN FLYTYAITLG  300
ICPFTLDEFA QAFYDKNSFL LGKIHMALLK LLFCDIEAEF SNAYLTPLSK SCKFLALVHL  360
LGSQDFALDV WKKSLNPLTW TEILRQVLIA AGFCSKQGAL QKETLSKEMN LMVKYGLQRG  420
TLKGELFIIL SEQGNNGIKV SDLTRESKIV DLNVAGTTEE LELLICSTLS SDITLFEKIS  480
SSAYRVRPSP ATMDVDEIQS DTDFGSVDDI AANASICSSS YDSECDSENL CSQITKIRKS  540
NNENPTVFME IDVSHPGEAW LLGLMEDEYS GLSIEEKLNA LVALIDLLSY GSSIKPKGTS  600
TSCAIDYASD IRRYGSGAKI KKSSVRGHNL SRSFLTSSGQ LHGASIRHAS LEHHPIDSTT  660
TISEFHENLV GQGNGANKMG DVIYLHPMQS IFLGSDRRYN RYWLFLGPCN ASDPGHRRVY  720
FESSEDGHWE VIDTEEALCA LLSVLDDRGK REAYLIESLE KRVAFLCEAM SNYSTRNLVS  780
RSFTQSEQSD MDRIRESSYS PVSDVDNSLN QAETTGDMLP SCSAIVLDVK RKGEEEKQSW  840
NCLQEFDSWV WNFFYHALYA VRHGKRSYLD SLARCESCHD LYWRDEKHCK VCHMTFELDF  900
NLEERYTIHR ATCREKEDDD VFPKHKVLSS QFQSLKAAVH AIESVMPEGA MVGAWTKSAH  960
KLWIKRLRRT SSLTELLQVV ADFVGAINED WFYNFPEGSS VDFRDTLASF TSLPQTTSAL  1020
AFWLVKLDAF LNCFLWKDLK GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein