PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976916.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 503aa MW: 55885 Da PI: 6.3648

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.1	1.9e-07	254	275	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 Cp+Cgk F+r nL+ H+r H XP_022976916.1 254 FCPICGKGFKRDANLRMHMRGH 275 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MEPEDSLCSS EVWAKSSSFP NINIQQPSQK WVDPSILDYA MEQPFQEFEE RIESKASLMC 60 SPNQRIEILD KDSNELNAGL LASKVQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNQ 120 ALGSPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH KLSAAVPPVG QFEQLDRVLF 180 ASGPRTNSGN GTKLPELPTQ VEESSKCGKE QNMAVEEHES KDEEDADEHE NLPPGSYEIL 240 QLEKEEILAP HTHFCPICGK GFKRDANLRM HMRGHGNEYK TAAALAKPNK ESSSETMLIK 300 RYSCPFTGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKSF TCSKCNSKKF SVIADLKTHE 360 KHCGKDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPLDE SKGAAVSFDQ GERSDKLRSI 420 NFSFGSIASG GSSVETIVDA KAGVDDPLGC FSPLNFESCN FEGFHEFPRP PFENVDNVFS 480 FLSPVSGNYT QKSGAGSSSN SLE

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MEPEDSLCSS EVWAKSSSFP NINIQQPSQK WVDPSILDYA MEQPFQEFEE RIESKASLMC  60
SPNQRIEILD KDSNELNAGL LASKVQDWDP RAMLNNLSFL EQKIHQLQEL VHLIVGRRNQ  120
ALGSPDELVV QQQQLITADL TSIIVQLIST AGSLLPSVKH KLSAAVPPVG QFEQLDRVLF  180
ASGPRTNSGN GTKLPELPTQ VEESSKCGKE QNMAVEEHES KDEEDADEHE NLPPGSYEIL  240
QLEKEEILAP HTHFCPICGK GFKRDANLRM HMRGHGNEYK TAAALAKPNK ESSSETMLIK  300
RYSCPFTGCK RNKDHKKFQP LKTILCVKNH YKRTHCDKSF TCSKCNSKKF SVIADLKTHE  360
KHCGKDKWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPLDE SKGAAVSFDQ GERSDKLRSI  420
NFSFGSIASG GSSVETIVDA KAGVDDPLGC FSPLNFESCN FEGFHEFPRP PFENVDNVFS  480
FLSPVSGNYT QKSGAGSSSN SLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein