PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976462.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 577aa    MW: 64474.6 Da    PI: 5.3019
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.92.6e-1292075761373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+++  +e  ++l+a  +  +s  g+p+qRl ay++e+L ar  +s+ ++y+al+++e +   s++ l+++++++e++P+lkf++
  XP_022976462.1 207 LKKLLIACAKALAEYRMEDFDKLVAAARGAVSIGGEPIQRLGAYMVEGLVARKEDSGANIYRALNCREPA---SDDLLSYMHMLYEICPYLKFGY 298
                     5799*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+isqG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + + le +++rLa++ ++ g+++ef+  v     +
  XP_022976462.1 299 MAANGAIAEACRNEDRIHIIDFQISQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKyaRGDGLEVVESRLAEISRKYGIKVEFHG-VPVFAPN 392
                     *******************************************************999999**************************.6888999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+++pgEalaVn+ lqlh+++desv+++++rd +L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr++++ri
  XP_022976462.1 393 ITRDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRDNKKRI 487
                     9********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+++ivnv+aceg+er+erhe ++kW++rl++aGF++ pls+++++ +++llr ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_022976462.1 488 NVEQHCLAKDIVNVIACEGREREERHELFGKWKSRLTMAGFRQFPLSSYVNSVIRSLLRCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 576
                     **********************************************************9999.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    
MDSHQLFGFG VNSAEFSYTS SYSSVPSLPN SLLGSVNFNF RNSPVSSSLF LSQFESDSFT  60
TTTVSDSQDQ RNSPDDLSGL SPSCNSSFET SSFNRIASSY LGSNAFVYEG CSTENISYAL  120
KQLESALMEP DNEEVVNKPD ESSRPQMMGQ RPYSWSQDQC GGSSYVVQSQ MSPVSRSQRS  180
EEVRLGKRQK SMDEPMLQQD GLPSDNLKKL LIACAKALAE YRMEDFDKLV AAARGAVSIG  240
GEPIQRLGAY MVEGLVARKE DSGANIYRAL NCREPASDDL LSYMHMLYEI CPYLKFGYMA  300
ANGAIAEACR NEDRIHIIDF QISQGTQWLT LLQALAARPS GAPHVRITGI DDPVSKYARG  360
DGLEVVESRL AEISRKYGIK VEFHGVPVFA PNITRDMLDI RPGEALAVNF PLQLHHTPDE  420
SVDVNNPRDG LLRLVKSLSP KVVTLVEQES NTNTTPFFNR FVETLDYYLA IFESIDVTLP  480
RDNKKRINVE QHCLAKDIVN VIACEGRERE ERHELFGKWK SRLTMAGFRQ FPLSSYVNSV  540
IRSLLRCYSE HYTLVEKDGA MLLGWKNRNL ISASAWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-160GRAS family protein