PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022976177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HB-other | ||||||||
Protein Properties | Length: 341aa MW: 38868.6 Da PI: 4.5333 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.4 | 1.1e-08 | 275 | 321 | 6 | 52 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++k q+ +Le+++++++ p+ +++ + + ++L+ +++ WF +R XP_022976177.1 275 RLKKVQVGTLERVYRRTKRPTNAMISSIVQVTNLPRKRIVKWFEDKR 321 57889**************************************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MALSAPVKAP EALLGSSSIS GRVSFFFRRQ FPSNLSLLRL PPVRHTLSIT FARRRNQNSS 60 VGPSSSSSKK KKRNSFPKKT RDEADEEEDA LELLFSQLEE DLKNDKLTLD DDDDDGEEDE 120 LSEEDLAKLE RELGLALGID VDEEEEEEEE EEEEEDLVDT EEEEMPVKLK NWQLRRLAMA 180 LKKGRRKTSI KSLAAELCLD RAVVLDLLRE PPPRLLMLSA SLPDPPTPSN PETRTLQATR 240 EEEEEEPVEV DTAEEAEEVK VPVHVMQQSW AAQKRLKKVQ VGTLERVYRR TKRPTNAMIS 300 SIVQVTNLPR KRIVKWFEDK RGEDGVPDQR LPYDRSAPQS A |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 73 | RRRNQNSSVGPSSSSSKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 2e-54 | HB-other family protein |