PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976176.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HB-other
Protein Properties Length: 341aa    MW: 38868.6 Da    PI: 4.5333
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.41.1e-08275321652
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                     +++k q+ +Le+++++++ p+ +++  + + ++L+ +++  WF  +R
  XP_022976176.1 275 RLKKVQVGTLERVYRRTKRPTNAMISSIVQVTNLPRKRIVKWFEDKR 321
                     57889**************************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MALSAPVKAP EALLGSSSIS GRVSFFFRRQ FPSNLSLLRL PPVRHTLSIT FARRRNQNSS  60
VGPSSSSSKK KKRNSFPKKT RDEADEEEDA LELLFSQLEE DLKNDKLTLD DDDDDGEEDE  120
LSEEDLAKLE RELGLALGID VDEEEEEEEE EEEEEDLVDT EEEEMPVKLK NWQLRRLAMA  180
LKKGRRKTSI KSLAAELCLD RAVVLDLLRE PPPRLLMLSA SLPDPPTPSN PETRTLQATR  240
EEEEEEPVEV DTAEEAEEVK VPVHVMQQSW AAQKRLKKVQ VGTLERVYRR TKRPTNAMIS  300
SIVQVTNLPR KRIVKWFEDK RGEDGVPDQR LPYDRSAPQS A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15373RRRNQNSSVGPSSSSSKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-54HB-other family protein