PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975949.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Nin-like

Protein Properties

Length: 914aa MW: 102056 Da PI: 6.6306

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.7	5.6e-29	593	642	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k+i+l++l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_022975949.1 593 KTITLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 642 89**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MEDCMLSPAT MLDAPAEAAM DLDYMDGLLL EGCWLETAEG TEFLHPSTAS FGANLDPLIA 60 WPTTDMNGDF HMSQITRTNH EEPRRILTDE ASMGRGRVDM EQEGCSGQSE NHGFEGSELC 120 RRLWIGPGDH LGSASSVMEK LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR NVLITNDLPF 180 SQNSSCTRLT KYRDVSVKYE FTADDDSKNA LGLPGRVFSR KVPEWTPDVR FFRSDEYPRV 240 NHAHEHDVRG TVALPIFEQG SKNCLGVIEV VMVTQQIKYG SELESVCKAL EAVKLRSSDV 300 IGHPDKKVFN RSNEAVLQEI QNTLKSACET HGLPLAQTWA SCIQQNREGC RHSDENYSCC 360 VSTVDRACFV ADPRVQEFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIT SFCNTEYPLS 420 HHAKLFRLHA AVAIRLRCIY NSKTDFVLEF FLPVDCRDPE EQRVLLTSLS TIIQRSCRSL 480 RLVNDKECRE ENMQQSCRRS KVEHQQLEMS HPTNSLLTSS VQNIQQQSGF VSLFQDGKTS 540 EILSSSGYQH HELNYNLNGV VEDSEECATV GNSCFSDTGL GRTGEKRRTK VDKTITLQVL 600 RQYFAGSLKD AAKSIGVCPT TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVEGAS 660 GAFQIGSLYS NFQDLASPNL SGSGPVLSAK MGDCMKTSSN PNEVGMSNLQ GGGASKSPSS 720 SCSQSSSSNQ CFSSRSHRSV GHWNKGGSED QMGGGENPCD GELKRVKSEV EIHVSIMEGS 780 NIPRRSQSCK SLCKHPATEC LVHSANEGDG MAERVEVQKV KVSYGEEKIR FRVHNQWRYE 840 ELLNEVGKRF SISDMSKFDL KYLDDESEWV LLTSDTDLEE CFHVYKSCRI QTIRLSVQES 900 RRHKRNCVVS GGFS

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MEDCMLSPAT MLDAPAEAAM DLDYMDGLLL EGCWLETAEG TEFLHPSTAS FGANLDPLIA  60
WPTTDMNGDF HMSQITRTNH EEPRRILTDE ASMGRGRVDM EQEGCSGQSE NHGFEGSELC  120
RRLWIGPGDH LGSASSVMEK LIRAVGYIKD FVRDKDVLVQ VWVPINRGGR NVLITNDLPF  180
SQNSSCTRLT KYRDVSVKYE FTADDDSKNA LGLPGRVFSR KVPEWTPDVR FFRSDEYPRV  240
NHAHEHDVRG TVALPIFEQG SKNCLGVIEV VMVTQQIKYG SELESVCKAL EAVKLRSSDV  300
IGHPDKKVFN RSNEAVLQEI QNTLKSACET HGLPLAQTWA SCIQQNREGC RHSDENYSCC  360
VSTVDRACFV ADPRVQEFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIT SFCNTEYPLS  420
HHAKLFRLHA AVAIRLRCIY NSKTDFVLEF FLPVDCRDPE EQRVLLTSLS TIIQRSCRSL  480
RLVNDKECRE ENMQQSCRRS KVEHQQLEMS HPTNSLLTSS VQNIQQQSGF VSLFQDGKTS  540
EILSSSGYQH HELNYNLNGV VEDSEECATV GNSCFSDTGL GRTGEKRRTK VDKTITLQVL  600
RQYFAGSLKD AAKSIGVCPT TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVEGAS  660
GAFQIGSLYS NFQDLASPNL SGSGPVLSAK MGDCMKTSSN PNEVGMSNLQ GGGASKSPSS  720
SCSQSSSSNQ CFSSRSHRSV GHWNKGGSED QMGGGENPCD GELKRVKSEV EIHVSIMEGS  780
NIPRRSQSCK SLCKHPATEC LVHSANEGDG MAERVEVQKV KVSYGEEKIR FRVHNQWRYE  840
ELLNEVGKRF SISDMSKFDL KYLDDESEWV LLTSDTDLEE CFHVYKSCRI QTIRLSVQES  900
RRHKRNCVVS GGFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein