PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974982.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 476aa    MW: 54581.5 Da    PI: 8.9026
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.81.2e-2748133186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW++qe+laL+++r++m+ ++r++  k+plW+evs+k+re gf+r+pk+Ckek+en+ k++k++ke ++++++++++ +++ d+le
  XP_022974982.1  48 RWPRQETLALLKIRSDMGVAFRDATHKAPLWDEVSRKLRELGFNRTPKKCKEKFENVYKYHKRTKEARSGKSNNTKKIYRFSDELE 133
                     8*********************************************************************9999999999999997 PP
2trihelix95.93.6e-30328413187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW+k+e+ aLi++r++me +++++ +k+  Wee+s +mr  g++rs+k+Ckekwen+nk++kk+k+++kkr +e+ +tcpy+ ql+a
  XP_022974982.1 328 RWPKEEIEALIRVRTRMEMKYEENGAKGLVWEEISTAMRGFGYNRSSKRCKEKWENINKYFKKVKDSNKKR-PEDAKTCPYYYQLDA 413
                     8*********************************************************************8.99999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MEVDSGEAVV EAAAAEAVET HEEVGGGGGG GGSNSGEEEK GLSFGGNRWP RQETLALLKI  60
RSDMGVAFRD ATHKAPLWDE VSRKLRELGF NRTPKKCKEK FENVYKYHKR TKEARSGKSN  120
NTKKIYRFSD ELEAFNHISF QSHHRQVAAT PSHYDQPGKI TTDTIISTMN NSLPPKPSNP  180
LSNFPNMAVN VVFSSSTSSS TASEEDPFQS RRRRRKKKRK WSDFFLRLTK EVIEKQEGLQ  240
LKFLEALERI ENQRKLRDEA WRIKEMKRVN QEHEVLVQEM SIAAAKDAAV VALLQKISPF  300
PSPPQPPPLP PPPPPPTRPQ DGDRRLSRWP KEEIEALIRV RTRMEMKYEE NGAKGLVWEE  360
ISTAMRGFGY NRSSKRCKEK WENINKYFKK VKDSNKKRPE DAKTCPYYYQ LDAIYKEKEK  420
GMSFDINSQM EPLMVEPEQQ WPPPFQVNQI MGNQEEEEEE EEESSSTEGL QSSISI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211217RRRRRKK
2211219RRRRRKKKR
3212218RRRRRKK
4212220RRRRRKKKR
5213219RRRKKKR
6213219RRRRRKK
7214219RRKKKR
8214220RRKKKRK
9214220RRRKKKR
10214220RRRRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-61Trihelix family protein