PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974961.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 551aa    MW: 61671.6 Da    PI: 4.7529
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.81.4e-1291825512374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +e LlecA a+s++++ +a+a++++l+ ++s +gdp qR+aay++e+Laarl+ s++ lykal+++e +   ss++laa+++++ev+P++kf+++
  XP_022974961.1 182 REMLLECAFAISEDNFDEASAMIEQLRGMVSVQGDPSQRIAAYMVEGLAARLLASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFM 273
                     578*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +aN aI ea++ e+r+HiiDfd+sqG+Q+++L+q La++p++pp+lR+Tgv++pes+      l+++g+rL+++A++l+vpfef++ +a++++d+
  XP_022974961.1 274 AANCAIIEAAKDEKRIHIIDFDVSQGTQYINLIQMLATQPGKPPHLRLTGVDDPESVhrPVGGLKHIGQRLEQLAKALRVPFEFQA-IASNTSDV 367
                     *******************************************************9988999************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++L+ ++gEa++Vn+++ lh+++desvs+ + rd++L++vk+l+Pk+v+vveq++++n+++F+ rf+e+ +y++a++++l+a+lpr+s++ri+
  XP_022974961.1 368 TPSMLASRHGEAVIVNFAFLLHHMPDESVSTVNLRDKLLRMVKNLNPKLVTVVEQDMNTNTTPFFSRFVETYNYFAAVYNTLDATLPRDSQDRIN 462
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vEr++l+++ivn+vaceg++r+er e ++kWr+r+++aGF++ ++s+++++ ++ l+ ++ ++ +++ ee g++ +gW++++L+ +S Wr
  XP_022974961.1 463 VERQCLAKDIVNIVACEGEDRVERYEVAGKWRARMTMAGFSSCTMSQNVTDPIRNLIGEYCER-FKMYEEMGTVHFGWEEKSLIITSTWR 551
                     *************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MSLVRPSDPS PLSYGSRKLY SLKGTKNAPD LSAQRFGSEM HRSESYEKYF LDFPIEELSI  60
SGVSGISNNS FHPNATSYGR TCDSDSACLE STSPEQLDFE DDQVRLKLQE LERDLLGEPD  120
AADYGVEMLV NGQAMEIDSE WANSIKDALL HDSPNESSST DSNFSTTGSN KDASQMSSQN  180
PREMLLECAF AISEDNFDEA SAMIEQLRGM VSVQGDPSQR IAAYMVEGLA ARLLASGKYL  240
YKALRCKEPP SSDRLAAMQI LFEVCPCFKF GFMAANCAII EAAKDEKRIH IIDFDVSQGT  300
QYINLIQMLA TQPGKPPHLR LTGVDDPESV HRPVGGLKHI GQRLEQLAKA LRVPFEFQAI  360
ASNTSDVTPS MLASRHGEAV IVNFAFLLHH MPDESVSTVN LRDKLLRMVK NLNPKLVTVV  420
EQDMNTNTTP FFSRFVETYN YFAAVYNTLD ATLPRDSQDR INVERQCLAK DIVNIVACEG  480
EDRVERYEVA GKWRARMTMA GFSSCTMSQN VTDPIRNLIG EYCERFKMYE EMGTVHFGWE  540
EKSLIITSTW R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein