PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974238.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 363aa MW: 40585.3 Da PI: 8.1613

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.6e-41	134	211	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrh+vCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_022974238.1 134 RCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQ 211 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MPISSPTISN LSSSFPSFAA VLAVLEMEIC GNLIGQSNAG RDQTANPTNV WEHLNSSRFH 60 LDWATANSTH GDAHQHHQCL YAGDHHQGGH FHRDPYLMCL KLGKRHYFED ATAPSVVGKR 120 GKPLYSTVPI SVPRCQVEGC HVALVNAKDY HRRHRVCEMH SKAPKVVVVG LEQRFCQQCS 180 RFHVISEFDD SKRSCRRRLA GHNERRRKSS QESVAARNWS GENKSRTGKI AYIPSPTGRA 240 LSLLSSKNES WETSSELSLR SSAALRELIA ENRAAILARQ LNLERDWHSN HTRTADDFGG 300 GVGLEQSWEK MHDGHGGAHV TLDLMQAPRT AFGLLSVSGK SKEEDEECRE LWNSFHDHDS 360 NVV

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MPISSPTISN LSSSFPSFAA VLAVLEMEIC GNLIGQSNAG RDQTANPTNV WEHLNSSRFH  60
LDWATANSTH GDAHQHHQCL YAGDHHQGGH FHRDPYLMCL KLGKRHYFED ATAPSVVGKR  120
GKPLYSTVPI SVPRCQVEGC HVALVNAKDY HRRHRVCEMH SKAPKVVVVG LEQRFCQQCS  180
RFHVISEFDD SKRSCRRRLA GHNERRRKSS QESVAARNWS GENKSRTGKI AYIPSPTGRA  240
LSLLSSKNES WETSSELSLR SSAALRELIA ENRAAILARQ LNLERDWHSN HTRTADDFGG  300
GVGLEQSWEK MHDGHGGAHV TLDLMQAPRT AFGLLSVSGK SKEEDEECRE LWNSFHDHDS  360
NVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	2e-40	SBP family protein