PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974237.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 381aa MW: 43076.8 Da PI: 5.246

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974237.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C +sFs+ L H+r+H XP_022974237.1 4 HKCRLCFRSFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	13.5	0.00021	252	274	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H XP_022974237.1 252 YKCETCNKVFRSYQALGGHRASH 274 9***********99999998887 PP
3	zf-C2H2	11.3	0.001	306	328	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H XP_022974237.1 306 HECPVCFRVFSSGQALGGHKRSH 328 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MDRHKCRLCF RSFSNGRALG GHMRSHMVNL PLPPKPEDPP SPPPPPPSHL HLSEDAADSA 60 SFLSSPSSSE GDAEEKGLSY GLRENPKRSI RIGDPEFSFA IDAGSVVLQD RESETESSKN 120 PTRRRSKRTR KPDHNHHHHH HYHHYNGFKR LNQTESWTET EPVSSISGST TEEDVAFWLM 180 MLSRDKWTKH QSGYGRRREV EDDDDDDDGD DGGDDDDDEE EEEEEEEMEE SMEETDDSEA 240 VKLTRNRNRG NYKCETCNKV FRSYQALGGH RASHKKIKVS VTYENPQLTT EQENAGTTTM 300 AERKIHECPV CFRVFSSGQA LGGHKRSHVT GFSSANSRIP AKKFSDSLID LNLPAPFEED 360 DLSQIEHSAV SDADFVNAIR Q

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MDRHKCRLCF RSFSNGRALG GHMRSHMVNL PLPPKPEDPP SPPPPPPSHL HLSEDAADSA  60
SFLSSPSSSE GDAEEKGLSY GLRENPKRSI RIGDPEFSFA IDAGSVVLQD RESETESSKN  120
PTRRRSKRTR KPDHNHHHHH HYHHYNGFKR LNQTESWTET EPVSSISGST TEEDVAFWLM  180
MLSRDKWTKH QSGYGRRREV EDDDDDDDGD DGGDDDDDEE EEEEEEEMEE SMEETDDSEA  240
VKLTRNRNRG NYKCETCNKV FRSYQALGGH RASHKKIKVS VTYENPQLTT EQENAGTTTM  300
AERKIHECPV CFRVFSSGQA LGGHKRSHVT GFSSANSRIP AKKFSDSLID LNLPAPFEED  360
DLSQIEHSAV SDADFVNAIR Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-45	C2H2 family protein