PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973653.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 776aa    MW: 89520.5 Da    PI: 8.0505
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.65.7e-2058132189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fY++YA++vGF+vr+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+++++g w+++ ++++HnH++
  XP_022973653.1  58 NFYSSYAQRVGFKVRIGQLYRSRTDGTVSSRRFVCSKEGFQLS--------------SRTGCPAVIRVQRRDSGMWVIDLFHKDHNHHF 132
                     6***************************************876..............589***************************97 PP
2FAR169.48.6e-22213289191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fYn+YA ++GF++r+ +  +sk++g+it+r+fvCskeg+++++              r gC a +++k++++gkw+v++l++eHnH+l p
  XP_022973653.1 213 QFYNAYAANAGFRIRIGQLFRSKNSGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRHESGKWVVDRLKKEHNHDLEP 289
                     6***************************************9994..............789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    
MSRDTDLNSE QCENAMIVKA YPIDMVRATD ELGGENDGNC MLEPFVGQEF DSSDAALNFY  60
SSYAQRVGFK VRIGQLYRSR TDGTVSSRRF VCSKEGFQLS SRTGCPAVIR VQRRDSGMWV  120
IDLFHKDHNH HFEHDDGGET LPTFQVKAPR SAKLTVNVSH RRKIHLFKDV EHAFSCSSGI  180
IDSKHLNERG NVIPPRGEPC VGLEFNSANE AYQFYNAYAA NAGFRIRIGQ LFRSKNSGSI  240
TSRRFVCSKE GFQHPSRLGC GAFMRIKRHE SGKWVVDRLK KEHNHDLEPQ PETQKRNLIV  300
SKRFTGELNG GFEGKEPVNL NYGIVIKRTR ENKIGSDWYT GLFEYFQSKQ AEDTGFFYAV  360
EVENSNCMSV FWADGRSRFS CSQFGDTIIL DTSYRKSAYA VPFATFFGVN HHKQPVLLAC  420
ALIAEESVES FSWLFQTWLR AMSGCHPLSI IADQDKAIQQ AVAQVFPRTL HCFSSWQIRK  480
KEQDNLNMLD ETFRFEYEKC IYQSQTAEEF DVGWNMLVGK YGLKDNAWFK EMYIKRNNWV  540
PLFLRGTFFA GIPTTDNFES CFGAAFNAQT PLAEFISRYE IGLERRRDEE RKESLNSLNL  600
QGFLQTKEPV EEQCLRLYTH AVFKVFQKEL LHCYRYLGFK IYEEVALSRY LVRRCENDNE  660
KCVVTVISTN LTVNCSCKMF EYEGILCRHI LRVFQILGIS EIPPRYILHR WTRNAEYGTL  720
QDVDTDGGPQ ELKAVMLWSL REAACKYIEA GATSLEKYKL AYEIMREGGR KLRWQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein