PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973652.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 788aa    MW: 90707.9 Da    PI: 7.969
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.65.8e-2070144189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fY++YA++vGF+vr+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+++++g w+++ ++++HnH++
  XP_022973652.1  70 NFYSSYAQRVGFKVRIGQLYRSRTDGTVSSRRFVCSKEGFQLS--------------SRTGCPAVIRVQRRDSGMWVIDLFHKDHNHHF 144
                     6***************************************876..............589***************************97 PP
2FAR169.39.1e-22225301191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fYn+YA ++GF++r+ +  +sk++g+it+r+fvCskeg+++++              r gC a +++k++++gkw+v++l++eHnH+l p
  XP_022973652.1 225 QFYNAYAANAGFRIRIGQLFRSKNSGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRHESGKWVVDRLKKEHNHDLEP 301
                     6***************************************9994..............789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    
MDKLLGTNLT NVSSSDTDLN SEQCENAMIV KAYPIDMVRA TDELGGENDG NCMLEPFVGQ  60
EFDSSDAALN FYSSYAQRVG FKVRIGQLYR SRTDGTVSSR RFVCSKEGFQ LSSRTGCPAV  120
IRVQRRDSGM WVIDLFHKDH NHHFEHDDGG ETLPTFQVKA PRSAKLTVNV SHRRKIHLFK  180
DVEHAFSCSS GIIDSKHLNE RGNVIPPRGE PCVGLEFNSA NEAYQFYNAY AANAGFRIRI  240
GQLFRSKNSG SITSRRFVCS KEGFQHPSRL GCGAFMRIKR HESGKWVVDR LKKEHNHDLE  300
PQPETQKRNL IVSKRFTGEL NGGFEGKEPV NLNYGIVIKR TRENKIGSDW YTGLFEYFQS  360
KQAEDTGFFY AVEVENSNCM SVFWADGRSR FSCSQFGDTI ILDTSYRKSA YAVPFATFFG  420
VNHHKQPVLL ACALIAEESV ESFSWLFQTW LRAMSGCHPL SIIADQDKAI QQAVAQVFPR  480
TLHCFSSWQI RKKEQDNLNM LDETFRFEYE KCIYQSQTAE EFDVGWNMLV GKYGLKDNAW  540
FKEMYIKRNN WVPLFLRGTF FAGIPTTDNF ESCFGAAFNA QTPLAEFISR YEIGLERRRD  600
EERKESLNSL NLQGFLQTKE PVEEQCLRLY THAVFKVFQK ELLHCYRYLG FKIYEEVALS  660
RYLVRRCEND NEKCVVTVIS TNLTVNCSCK MFEYEGILCR HILRVFQILG ISEIPPRYIL  720
HRWTRNAEYG TLQDVDTDGG PQELKAVMLW SLREAACKYI EAGATSLEKY KLAYEIMREG  780
GRKLRWQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein