PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022973558.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 579aa    MW: 64431.8 Da    PI: 4.8914
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022973558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.17.4e-1382115701374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L+ cAeav++++l+la+al++r+  la +++ +m+++a++f+eALa+r++r        l p++  ++++ + l+    f+e +P+lkf+h
  XP_022973558.1 211 LVHALMVCAEAVQQNNLNLAEALVKRIDYLAVSQAGAMRKVATFFAEALARRIYR--------LCPENPLDRSVLDMLQ--MHFYESCPYLKFAH 295
                     689****************************************************........3333333333444444..35************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+eg++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++++++ l+ +g++LakfAe+l+v+fe++ +va++l+dl+
  XP_022973558.1 296 FTANQAILEAFEGKKRVHVIDFSMNQGMQWPALIQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLAKFAETLHVEFEYRGFVANSLADLD 390
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                      ++L+++p   E+++Vn+v++lh+ll++++++e+    vL++vk+++P++v+vveqea+hn++ F+erf+e+l+yys+lfdsle +    +++++
  XP_022973558.1 391 ASMLELRPseVESVVVNSVFELHQLLARPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECS---PNSQDK 478
                     ********88899*********************....**********************************************99...688899 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++++lg++i+nvvacega+r+erhetl +Wr rl++aGF p++l+++a kqa+ ll+ ++ ++gyrvee++gsl+lgW++rpL+++SaW+
  XP_022973558.1 479 MMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGsGEGYRVEENEGSLMLGWHTRPLIATSAWK 570
                     999999*************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MKREHHYLHP RPEPPSVATG SNRESYLNTG KAKLWEEEVQ LDGGMDELLA VLGYKVKSSD  60
MAEVAQKLEQ LEEAMCQVQD TGLSHLAFDT VHYNPSDLST WVESMLTELH PPPTSHLDDS  120
SFLAPAESST IANVDYEPQL QTSSRIFEES SSSDYDLKAI TDSAIYSPRE SKRLKASESD  180
TDVFSTSAIG ASNFATRPVV LVDSQENGIQ LVHALMVCAE AVQQNNLNLA EALVKRIDYL  240
AVSQAGAMRK VATFFAEALA RRIYRLCPEN PLDRSVLDML QMHFYESCPY LKFAHFTANQ  300
AILEAFEGKK RVHVIDFSMN QGMQWPALIQ ALALRPSGPP TFRLTGIGPP APDNSDYLQD  360
VGWKLAKFAE TLHVEFEYRG FVANSLADLD ASMLELRPSE VESVVVNSVF ELHQLLARPG  420
AIEKVLSVVK QMKPEIVTVV EQEANHNGPV FVERFTESLH YYSTLFDSLE CSPNSQDKMM  480
SEMYLGKQIC NVVACEGADR VERHETLTQW RTRLSSAGFD PIHLGSNAFK QASILLALFG  540
SGEGYRVEEN EGSLMLGWHT RPLIATSAWK PGNNPVVAH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein