PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022973299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | SBP | ||||||||
Protein Properties | Length: 369aa MW: 41007.5 Da PI: 7.7893 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 6.1e-42 | 89 | 165 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC +dls+ ++yhrrhkvCe hsk+p+v++ gl+qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_022973299.1 89 CLVDGCVSDLSNYRDYHRRHKVCELHSKTPQVTIGGLKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 165 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MDWNLKAPYW DFTQLEHDAS KNINTIGASS NFVEHRTTTS RDFSVDLKLG QVSHLGTKYA 60 VNKLKMAPSP SEPSKRARGC GNGAQPLSCL VDGCVSDLSN YRDYHRRHKV CELHSKTPQV 120 TIGGLKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPQPEALSH YQGSPFIPFS 180 TSYVYPSSTT VANHSWCGIS NTNTDASLHT QQHSTHFPDK HHMYLGSSSN DSIIHKIPKQ 240 VTFLQSDNPE SLVCQPLDFS ENVGGRGKLF FDRFSNPGHE SDCALSLLSS LQTRSSGVGL 300 SQPDQDSNLM SFMQPLDVSL GHHNSLDPLN SVLNGSVSNA DISCSGMFQS ASDDGGREAP 360 PPSLPFHWQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 163 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 8e-51 | SBP family protein |