PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972981.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 586aa    MW: 64357.8 Da    PI: 5.5343
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.86.5e-1022305865374
            GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                     ++e+A a+s+g+le ++++L       +p   ++ +la +++ AL++r++      ++ +pp   +    +e++aa++l+++vsP++k+++++aN
  XP_022972981.1 230 VIEAAAAISDGKLEGIDEIL-------APVVVSNVKLAEFMVFALKSRVNP-----VE-FPPPVVE-IYGEEHTAATQLLYDVSPCFKLAFMAAN 310
                     45555555555555555555.......56667889***************9.....33.3332222.34999*********************** PP

            GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                      aIlea+ ++ +++H++Dfd+++G+Q+++L++ L++R++g+ s+++T+v+++es+ +e+l+++ge L+++A+elgv fefn+ v ++l++l+ e 
  XP_022972981.1 311 LAILEAIGEDdRKMHVVDFDLGKGGQYMNLIHLLSNRQKGKVSVKLTAVVAAESDGEERLKQIGESLSQLADELGVGFEFNL-VRHKLAELTREL 404
                     *******9886889*******************************************************************9.799********* PP

            GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288
                     L+++p+E laVn++++l+r++desvs+e++rde+L+ vk l P++v+v+eqe+++n+++F +r++e++ yys+lf+s+++++ r++ +r+kvE+ 
  XP_022972981.1 405 LSCEPDELLAVNFAFKLYRMPDESVSTENPRDELLRSVKALAPTIVTVMEQELNMNTAPFSARVAESCIYYSSLFESIDSTMQRDHPDRVKVEEG 499
                     *********************************************************************************************** PP

            GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      lgr++ n +aceg++r+er+e ++kWr+r+++aGF++ p+s+++a+++k+ l+  +  + g++v+ee+g +++gW++r+L++++aWr
  XP_022972981.1 500 -LGRKLANSLACEGRDRVERCEVAGKWRARMGMAGFEARPISQTVAESMKTRLSSGYrvNPGFTVKEENGGICFGWMGRTLTVTTAWR 586
                     .*************************************************99887655889**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MQSGFTGGGA PDFYTAGRSI PNPSQPNPYR SQLSGGAFLD PTATQIGRQI PSSLLGKRNL  60
ADLQHTHHHN LPLNNLFLRS VKPRAFAHPI SPLSNLDFYS TMSLPSTDVQ SHRLYGTSST  120
ALLQQFRQQP NGVVPARDLQ SLDSEKKMIM NHRLQELEKE LLEDIDDDDG SDAVSVITNS  180
NSPWCETIYN LISPTVAQNR SPTSSASSSC SSSTSSSVAS KASDSWKQSV IEAAAAISDG  240
KLEGIDEILA PVVVSNVKLA EFMVFALKSR VNPVEFPPPV VEIYGEEHTA ATQLLYDVSP  300
CFKLAFMAAN LAILEAIGED DRKMHVVDFD LGKGGQYMNL IHLLSNRQKG KVSVKLTAVV  360
AAESDGEERL KQIGESLSQL ADELGVGFEF NLVRHKLAEL TRELLSCEPD ELLAVNFAFK  420
LYRMPDESVS TENPRDELLR SVKALAPTIV TVMEQELNMN TAPFSARVAE SCIYYSSLFE  480
SIDSTMQRDH PDRVKVEEGL GRKLANSLAC EGRDRVERCE VAGKWRARMG MAGFEARPIS  540
QTVAESMKTR LSSGYRVNPG FTVKEENGGI CFGWMGRTLT VTTAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-147GRAS family protein