PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972856.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Nin-like | ||||||||
Protein Properties | Length: 304aa MW: 34841.1 Da PI: 6.0792 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 80 | 2.5e-25 | 150 | 199 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +s +++s+yF +pi +AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl XP_022972856.1 150 KGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 199 77999******************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MISLFITQNP KLISFLHDFV ICSCALILVL RFIGCAPSPM PSPLNSFPFL LPLQFSNSFG 60 EEEMDPFPSS CHLSPLHFRS CNFGFQDSIF DVVPLFETCP NDSFLVLKDI EPINTIISED 120 GGENEKNGLE RKEGRGKRKW CGETSSSPSK GLSRKTISEY FWMPISQAAK ELNVGLTLLK 180 KRCRELGIRR WPHRKLMSLQ TLIKNVKELE KEDGVKLRHV LEILENEKKL MEERPDLQLE 240 DNTKRLRQAC FKANYKKKRL SGTNNSSATR VLQDDEEEEE EDEEMKYLLA DCSFSFTGGS 300 LLLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 3e-53 | Nin-like family protein |