PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022972112.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 256aa    MW: 29474.3 Da    PI: 6.2488
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022972112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.63.2e-2675165190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y+++vGF+vr++++++s+ n++++ ++fvCskeg+r+++  +++++      + tr gC+a++++ +++ gkw vtk++++HnH l 
  XP_022972112.1  75 EFYVNYGRHVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVSRKDR-IlpAPPITREGCQAMIRLALRDGGKWAVTKFVKDHNHLLL 165
                     6******************************************99883322.2447899******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDCQSNHTFD SDESDIDIQA EIYEKGGSID DIHKDLDFCL REDDKVAEQS VVDLPMDGAE  60
PYIGMEFGSR DEAREFYVNY GRHVGFTVRI HHNRRSRVNN QVIGQDFVCS KEGFRAKKYV  120
SRKDRILPAP PITREGCQAM IRLALRDGGK WAVTKFVKDH NHLLLSPSKV PWRGSGKNLL  180
TEDEKDKRIR ELSLELYNEK QKCKRKCAAY EEQLKAVLKE LEMHTECISN KVAEVMKSIR  240
EVEDEEHSGG LNQGWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-40FAR1 family protein