PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022972035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 252aa MW: 28968.6 Da PI: 6.9588 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 91.9 | 8.1e-29 | 88 | 175 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+s+ ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p XP_022972035.1 88 FYNAYATRVGFVIRVSRLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKITSGKWVVTKFVKEHTHPLSP 175 ******************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MEVEFGVDGD SEVVGNSTLV EDSKPLDENE TGVSSIERIF DHDRDEKIIQ DSSGRNAILD 60 SVPGLPVVQG DEPYIGQEFE NEAAAHAFYN AYATRVGFVI RVSRLSRSRR DGTAIGRALV 120 CNKEGYRMPD KREKIVRQRA ETRVGCRAMI LVRKITSGKW VVTKFVKEHT HPLSPGKSRR 180 DCIYDQYPNE HDKIRELSQQ LAVEKKRSAT YKRHLEVIFE YIEEHNNNLS RKIQHIVDNV 240 KEMENIEQQN LR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-88 | FAR1 family protein |