PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022971433.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 616aa    MW: 69164.4 Da    PI: 5.3689
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022971433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS200.78.9e-623825771198
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+av+++d+++a++lL++++++asp gd +qRla++f+ +L+arla+++s++yk l  ++ts    +++l+a++l+  ++P+ k+s+
  XP_022971433.1 382 LRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLINKRTS---AADVLKAYHLYLAACPFRKISN 473
                     6789************************************************************888888...89******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t N++ + a e+++++H+iDf+i +G+QWp+L+q L+ R++gpp+lRiTg++ p++g   +e++eetg+rL+ +Ae+++vpfe+n+ +ak++e+
  XP_022971433.1 474 FTSNRTTMIASENATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGfrPAERVEETGRRLEAYAETFNVPFEYNA-IAKKWET 567
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkp 198
                     +++e+L++++
  XP_022971433.1 568 ITVEDLNIDQ 577
                     *******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MDPRLRRHGG SMNGILLDNG SFLVQSQEDG IGSIFQNTIM SHSFQEFDCL PPDPSPSTIA  60
SSSSVITSSS NDASHEEDYL EDCDFSDAVL RFINQILMEE DMEDKTCMLQ DSLDLQAAEK  120
PFYEVLGKKY PPSPEPNRSL GNQYSDSFNE ELCGDSSNYL IGYNNTSYYG DDNAFETQSG  180
DVFRIRSTLG DTISPSSNSS SNRIVNGADG WVDFSNNAIR IPEPNNRSQS IWQFQKGLEE  240
ASKFLPGGNN LCLDFEGNES ATQGLDEGTC QMYVKAARND QRKTLSLESR IRKNLHDEDG  300
DLEEERSSKQ AAISTESTLR SKMFDIVLLC SAGEGHDRLV SFRQELRNAK IKSMLQTGQL  360
KESNGGRGRR KKQSGKKEVV DLRTLLISCA QAVAADDHRN ASELLKQVRQ HASPFGDGNQ  420
RLASCFADGL EARLAGTGSQ IYKGLINKRT SAADVLKAYH LYLAACPFRK ISNFTSNRTT  480
MIASENATKL HVIDFGILYG FQWPTLIQRL SWRKGGPPKL RITGIEFPQP GFRPAERVEE  540
TGRRLEAYAE TFNVPFEYNA IAKKWETITV EDLNIDQDFE RPCFTFLLSL IRLKLLYLVR  600
IGRECYWRER SLVGRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-135GRAS family protein