PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022971305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 229aa MW: 24645.8 Da PI: 4.6543 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.8 | 2.2e-06 | 126 | 147 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C+k+F+++ L H+r+H XP_022971305.1 126 RCATCNKVFKSWKALFGHLRSH 147 6********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MEKNANTNVP PETSSDQCHG GERSPTGPTS PPPTHNRDNN PNPTTGHSSY SDTLLVPPAA 60 DTSRRDALLD IGTSYENVVG SSDGEPGKKR GRGDGEEEEE EQQPQQQVKA AKKKGELTEV 120 PKGEPRCATC NKVFKSWKAL FGHLRSHPER TYRGALPPPT AAELDIRRCQ QQLASTLLTV 180 AQEVAASRRG LDIDLNQPST ADDGDWPEKT GGVGFDLNAD PPPGSDDED |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 93 | GKKRGRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35700.1 | 2e-17 | C2H2 family protein |