PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970999.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 473aa MW: 52201.5 Da PI: 9.4066

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.8	4.4e-06	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk F r nL+ H r H XP_022970999.1 113 FVCEICGKGFQRDQNLQLHRRGH 135 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MCHLPHSLSL SLSLLIFQTK PFSSLSPFFP KPSQSSERKT QFCSLGSTKP MQQSLRMMEK 60 MVNDEFPNSF LQIPLARSNP FSPKKKRNHP GTPDPDAEVI ALSPKTLMAM NRFVCEICGK 120 GFQRDQNLQL HRRGHNLPWK LKQRSNKEVR KRVYVCPETS CVHHHPSRAL GDLTGIKKHF 180 CRKHGEKKWK CEKCSKRYAV QSDCKAHSKT CGTKEYKCGC GTLFSRRDSF ITHRAFCDAL 240 AEETARVNAA TTITAAMASA ANFNCNFMAG VTEPPFMPSI FSCNGLSSRT NTNNNLHPIP 300 QINSGLMYCD PLLNSCHAPP PADYNLNWVF GTKGHDSVQN PPLMSGGGGV SSLYSHQLQQ 360 VNQTHMANMS ATALLQKAAE IGPNSSSDPP FFQEGFVFKC SGGTVQNGSE FSNSVTQIPI 420 MANENEMYTA KRRRTQSEFM GSGSGLTGGG QTRDFLGVGA NTICHTSSIN GWI

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MCHLPHSLSL SLSLLIFQTK PFSSLSPFFP KPSQSSERKT QFCSLGSTKP MQQSLRMMEK  60
MVNDEFPNSF LQIPLARSNP FSPKKKRNHP GTPDPDAEVI ALSPKTLMAM NRFVCEICGK  120
GFQRDQNLQL HRRGHNLPWK LKQRSNKEVR KRVYVCPETS CVHHHPSRAL GDLTGIKKHF  180
CRKHGEKKWK CEKCSKRYAV QSDCKAHSKT CGTKEYKCGC GTLFSRRDSF ITHRAFCDAL  240
AEETARVNAA TTITAAMASA ANFNCNFMAG VTEPPFMPSI FSCNGLSSRT NTNNNLHPIP  300
QINSGLMYCD PLLNSCHAPP PADYNLNWVF GTKGHDSVQN PPLMSGGGGV SSLYSHQLQQ  360
VNQTHMANMS ATALLQKAAE IGPNSSSDPP FFQEGFVFKC SGGTVQNGSE FSNSVTQIPI  420
MANENEMYTA KRRRTQSEFM GSGSGLTGGG QTRDFLGVGA NTICHTSSIN GWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-127	C2H2 family protein