PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022970520.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 674aa    MW: 76565.4 Da    PI: 6.2652
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022970520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.81.6e-1163046713373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+a+s+ d++ a++lL+++++++sp+gd +qRla+yf+++L++rla  ++ ly  ++++ets    +e l+a+++f  ++P+ ++s++ 
  XP_022970520.1 304 TLLTQCAQAISNYDQRTANELLNQIRQHSSPSGDGNQRLAHYFANGLETRLAA-GTPLYMPFASNETS---AAEILKAFQMFIRACPFRRMSYFY 394
                     69**************************************************9.99999888888877...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN++I++ +e+e+++HiiDf+i +GlQWp+L+q L+ Rp+gpp++RiTg++ p++g   +e++e+tg+rLa+++++++vpfe +v +a+++e+++
  XP_022970520.1 395 ANRTIMKLAEKETTLHIIDFGILYGLQWPCLIQRLSRRPGGPPKVRITGIELPQPGfrPAERVEQTGRRLAHYCKRFNVPFEHKV-LAQKWETVK 488
                     *******************************************************9****************************9.6******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+v+++E ++V + ++l++++de+v  +s+rd+vLkl+++++P+++++   + + n++ F +rf eal +ys+lfd++ea++pr+  er+  
  XP_022970520.1 489 YEDLNVDRDELTIVTCLFRLKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVINGSFNTPFFNTRFKEALFHYSSLFDMYEATMPRDIPERHLC 583
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     E+e+lgr+ivnv+aceg er+er et+++W+ r ++aGFk+vpl+++  k+++ ++++ + + + ++++  ++++gWk+r ++++S+W
  XP_022970520.1 584 EKEILGRDIVNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKNVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIYALSCW 671
                     **********************************************************99888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MDNILDDFPN SFNNFHFNPQ LSNGFLKINR ETVDPLEIPA KPQQNQQQIS NNSSSPSSMS  60
PSTSEGDSPD SQDTSNTMLK YITEMLMDEG EDLKTKPCML LDCLALQAAE KSFYDVLGQK  120
YPPSPTGNGD SPQDFSCGEA LGDSSVLGLS ENCVVGHDSF VGMQYIGHFR QGVEEASKFL  180
PVNGTFGTID LDNDLCVSVP FKDVDVSRIS GSLRDKKNRQ REEESDGELR SSKQSATFAD  240
DNSLSDLFDE VLLCRGESRR SPCGSDESSE TEVNKKKSRG RRRKGKKTRS KKQDNSVGVV  300
DLWTLLTQCA QAISNYDQRT ANELLNQIRQ HSSPSGDGNQ RLAHYFANGL ETRLAAGTPL  360
YMPFASNETS AAEILKAFQM FIRACPFRRM SYFYANRTIM KLAEKETTLH IIDFGILYGL  420
QWPCLIQRLS RRPGGPPKVR ITGIELPQPG FRPAERVEQT GRRLAHYCKR FNVPFEHKVL  480
AQKWETVKYE DLNVDRDELT IVTCLFRLKN VPDETVVANS PRDRVLKLIR KINPDLFIHE  540
VINGSFNTPF FNTRFKEALF HYSSLFDMYE ATMPRDIPER HLCEKEILGR DIVNVIACEG  600
LERVERPETY KQWQVRNTRA GFKQVPLDQD LLKNVEKIVN TEYHQDFVID QDGSWMLQGW  660
KGRIIYALSC WVVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein