PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022970330.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 307aa MW: 35023.8 Da PI: 8.8663 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.7 | 2e-05 | 143 | 162 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+ksF+r n++ H+ XP_022970330.1 143 FACSICHKSFNRYNNMQMHM 162 78*****************9 PP | |||||||
2 | zf-C2H2 | 11 | 0.0013 | 227 | 249 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ XP_022970330.1 227 FMCRKCGKTLAVKGDWRTHEKNC 249 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MGLRNHMAQE NHITFIEWLK PSISLSSSLS SSSSSSSDRD LISPTTAQRC LPLFTEKDEE 60 RGRIRDRERK SLGIKEEDED LVKVEVGLHI GLPNVGDVPN FGDGNMNGFV KKEEMQKSFS 120 NFSTQGRFWI PTPAQILVGP MQFACSICHK SFNRYNNMQM HMWGHGSEYR KGPESLRGSQ 180 PAAMLRLPCY CCAHGCKNNI NHPRAKPLKD FRTLQTHYKR KHGSKPFMCR KCGKTLAVKG 240 DWRTHEKNCG KLWYCSCGSD FKHKRSLKDH IRSFGKGHHP TCPLDGFEDD KECLTGSDQE 300 HEFATHY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08290.1 | 1e-108 | C2H2 family protein |