PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022970328.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 321aa MW: 36513.3 Da PI: 8.4254

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022970328.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23.5	1.4e-07	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cgk F+r nL+ H+r H XP_022970328.1 168 HYCQICGKGFKRDANLRMHMRAH 190 68*******************99 PP
2	zf-C2H2	11.7	0.00077	259	282	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_022970328.1 259 YVCKLCSgKKFSVLSDLRTHEKHC 282 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MPFSSDFHSS SLLYNLSILK DKLHQIQSVV SVVVYDFQNS TESHPRDLSQ LPTVNSMIQE 60 LIMAASSMLF TCQEMNNFAV NSSLHNDVVD NNLQGLVDND NQPSIALLDV ANDHRHHQNW 120 YNMTSTTNND DNDNNSNRVT TTETTQDYRT SINIVELDAT DLLAKYTHYC QICGKGFKRD 180 ANLRMHMRAH GDEYKASGAL SNPEKSHRRD MNINKKLGTK YSCPQEGCRW NQKHAKFQPL 240 KSLICVKNHY KRTHCPKMYV CKLCSGKKFS VLSDLRTHEK HCGDMKWVCS CGTTFYRKDK 300 LMGHVALFVG HAPAISSSVR A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-104	C2H2 family protein