PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022969106.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 419aa    MW: 47005.8 Da    PI: 6.2419
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022969106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS300.63.8e-92444122373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl..fsevsPilkf 93 
                     ++lLl+cA a++s+d +laq++++ l++ asp gdp+qRl+  f++AL +r +r +++   +  + + +s +  ++ +++++l  ++++ P+++f
  XP_022969106.1  44 EKLLLHCASALESHDVTLAQQVMWVLNNVASPVGDPNQRLTCWFLRALISRASRVCPTPTPTPmNFNGSSARIDTRFMSVTELarYVDLIPWYRF 138
                     689***************************************************7666554441444444444555555666699********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakr 185
                     ++ +aN aI++a++++ +vHi+Df+is+++QWp+L++aL++Rp+gppslRiT+ +   s+    + +++++g  L+kfA++ ++pf+fnv + ++
  XP_022969106.1 139 GFCAANIAIYKAIQRCPKVHILDFSISHCMQWPTLIDALSKRPQGPPSLRITVPSFRPSVpplLNISTQQIGLCLSKFANSKNIPFQFNV-IDNH 232
                     ****************************************************99986666889999***********************9.6999 PP

            GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      +++++++L+++++E+l++n+++ l ++l      ++e d+++++ ksl+P+++vvv++++d++++s+  r++ +++y++  fd+le+ l+++s 
  XP_022969106.1 233 NTSIDPSSLSLEEDETLVINCQHWLRYML------NEEEDDFINATKSLNPRIMVVVDEDSDMSDSSLTSRITTCFNYFWIPFDALETFLAKDSA 321
                     999*************************9......444689****************************************************** PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +r  +E+  +g++i+n++  eg++r+er e+  k +er+++ G+ +vp+ ++++++ k+ll++ +  g+ ++ e+++lvl+Wk+++ v+v+aW
  XP_022969106.1 322 QRLEYEAD-IGQRIQNIIGLEGKQRVERLESCVKVSERMRNGGYLNVPFCDDVEAELKALLAEQA-SGWGMKREEDTLVLTWKGHNSVFVTAW 412
                     ********.******************************************************99.88999999******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MRAELKGKTS SISVHNSTIL SRPHSSLSGA LKGCLGSLDG GCIEKLLLHC ASALESHDVT  60
LAQQVMWVLN NVASPVGDPN QRLTCWFLRA LISRASRVCP TPTPTPMNFN GSSARIDTRF  120
MSVTELARYV DLIPWYRFGF CAANIAIYKA IQRCPKVHIL DFSISHCMQW PTLIDALSKR  180
PQGPPSLRIT VPSFRPSVPP LLNISTQQIG LCLSKFANSK NIPFQFNVID NHNTSIDPSS  240
LSLEEDETLV INCQHWLRYM LNEEEDDFIN ATKSLNPRIM VVVDEDSDMS DSSLTSRITT  300
CFNYFWIPFD ALETFLAKDS AQRLEYEADI GQRIQNIIGL EGKQRVERLE SCVKVSERMR  360
NGGYLNVPFC DDVEAELKAL LAEQASGWGM KREEDTLVLT WKGHNSVFVT AWVTDELAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-102GRAS family protein