PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022969008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 675aa MW: 78200.2 Da PI: 7.0845 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 76.5 | 5.4e-24 | 76 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022969008.1 76 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 167 69********************8888.******************************************998767789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 675 aa Download sequence |
MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SARLVKSETV PSQLSSESVF 60 APYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRRDFVCY RSGYNQPRKK 120 ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK 180 IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA 240 FLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENVSFD MSYRSLTYGL LLGVWFGMSN 300 HGKAIIFSCV LLQEENSHSF SWALQKFVQF MRGKHPRTIL TDIDSGLRDA ISRELPNTKH 360 VVCIWHILSK LSSWFLLPLG LHYADFKVQF DMLWHLENIS DFEHQWDLLV AQFGLASDKH 420 IALLYLYRAS WPFSFIKSSF LARTLTADFF QSLETFLKRI LGAQTCLQVF FEQVSNAAYS 480 GSRAKEGMQY LHIKTGMPIE EHAQGTLTPY AFNALQNEIV LSMQYVATEM GNGSYLLQHY 540 KKMDVERLVS WTQDDEQVHC ACKEFDHSGI LCRHSIRVLA VKNYFKLPDK YFLLRWRLQN 600 SLGTIDDAHS QGRSEACAQA FHSLAATLLT ESLVSQERFN YVHRELSGLL EHVRTMPVVD 660 EFSLNTTTVN EFNDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |