PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022969007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 693aa MW: 80115.3 Da PI: 7.0093 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 76.4 | 5.6e-24 | 71 | 162 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022969007.1 71 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 162 69********************8888.******************************************998767789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 693 aa Download sequence |
MAMKLPANIW IRRQQCPCGD WKCYIRYEGE DQASISARLV KSETVPSQLS SESVFAPYVG 60 QIFKSDEDAF EYYSNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGYN QPRKKANVEH 120 PRERKSVRCG CDAKLYLTKE IVDGVSQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEAD 180 QERILLLSKA GFPVNRILKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV EENDAFLNEK 240 RENELLELLE ICKAMAKRDT EFVFDYTRDE NGKVENLSWA YGDPIHAYSV FGDVVSFDMS 300 YRSLTYGLLL GVWFGMSNHG KAIIFSCVLL QEENSHSFSW ALQKFVQFMR GKHPRTILTD 360 IDSGLRDAIS RELPNTKHVV CIWHILSKLS SWFLLPLGLH YADFKVQFDM LWHLENISDF 420 EHQWDLLVAQ FGLASDKHIA LLYLYRASWP FSFIKSSFLA RTLTADFFQS LETFLKRILG 480 AQTCLQVFFE QVSNAAYSGS RAKEGMQYLH IKTGMPIEEH AQGTLTPYAF NALQNEIVLS 540 MQYVATEMGN GSYLLQHYKK MDVERLVSWT QDDEQVHCAC KEFDHSGILC RHSIRVLAVK 600 NYFKLPDKYF LLRWRLQNSL GTIDDAHSQG RSEACAQAFH SLAATLLTES LVSQERFNYV 660 HRELSGLLEH VRTMPVVDEF SLNTTTVNEF NDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |