PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022968978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 790aa MW: 91053.7 Da PI: 6.6632 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 100 | 2.5e-31 | 82 | 173 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka+l vk++++gkw+v+ ++ eHnHel+p XP_022968978.1 82 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRtkDREIKRPRTITRVGCKASLSVKMHDSGKWVVSGFVREHNHELVP 173 9***************************************999888555667889***********************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 790 aa Download sequence |
MDNEVIEFDI GLGGGSGREG DDYSIGMVHH SIEDEEMVDS PPLSSLGGGA GSGEIYLPEG 60 DLLDLEPYEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF 120 RNMNEKRTKD REIKRPRTIT RVGCKASLSV KMHDSGKWVV SGFVREHNHE LVPPDQVHCL 180 RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL 240 EGDIQLLLDY LRQMHSENPN FFYAVQGEED QCVGNVFWAD PKARMNYTYF GDTVTFDTTY 300 RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG RPPVSITTDH 360 DAIIQSAITQ VFPETRHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE 420 SCWLSLVDRY DLRDHEWLQT IYSARRQWVP VYLRDTFFAE MSITQRSDSM NSYFDGYVNA 480 STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQE 540 ELVGTLTFMA SKADDDGEII TYQVAKFGED HKAHYVKFNV LEMRASCSCQ MFEFSGLLCG 600 HILAVFRVTN VLTLPSYYIL KRWTRNAKSN VMLDDHVNDI YNNYLESHTV RYNTLRHEAF 660 KFIEEGAKTV DTYNVAKDAL QEAAKRVAHT MRNDGKNSTI NGRIKMDPGN DRSYTYHSSS 720 RDHDEILSKN MSEDDLDKKI NELTNELECA NRKCDVYRSN LFSMLKDIED HKLQLSIKVQ 780 NIKISMKDSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 0.0 | FAR1 family protein |