PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022968923.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1743aa MW: 195887 Da PI: 5.8899

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022968923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.8	1.8e-18	21	75	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ ++yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022968923.1 21 KRKMKTASQLEILEKAYMGEPYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 75 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1743 aa Download sequence
MEVSSEGEKK PPPPVEATKI KRKMKTASQL EILEKAYMGE PYPSEALRAE LSVKLGLSDR 60 QLQMWFCHRR LKDRKPPPVK RPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH 120 PVDVRPGVAV ARIGLNLPSM NRFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP 180 LPPGAFGAPI GVTAFSDDEK KTGQFFEVSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK 240 SDEHERDISS YHYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ 300 SRRSHNLVSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI 360 EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR 420 EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ 480 MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKDMRPNF PPESVQMKRP 540 FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL 600 KCIIKDIEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE 660 ILRQLALSGG LGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF 720 SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA 780 ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS 840 EVDVPEDAEV HDLGTGGNLT KEHQSPEVCP LDEMTSVASG NGCNEIRDIC KVGMENGGPY 900 TSILDIKGRV KGEESPPVEQ PIFISGICTG QYQEDSTSDE GDHGEPWVQG LTEGEYSDLS 960 IEERLNALCS LIGVALEGNS MRTILEERLE AANSLKKQML AEAQIDKRRV KEEYVLQIHD 1020 SLSVGNKSEF KTMSSLDATR LSAILNIGEE NREGPLDTGF QQEDCHSSHN NCPSDGLQVQ 1080 DVLVEADNSQ LQHSVVAVEK SRSQVKSYIG HKAEEMYVYR SLPLGQDRRR NRYWQFTSSA 1140 SRNEPGNGRI FVELHNGTWR LIDSAKGFDA LLASLDVRGI KESHLHLMLQ KLEKSFKTAT 1200 RGNILTDGQR TGEDAAGHHC NARNNGPSST VYADNHDGFE SSTSFRSEAE ETGSDTTESL 1260 KRYLDFESWM RRECFSLSVL SANKYGKKQG TQLLGIXRSY QFIYSENFHH CCSSILYFPE 1320 HMVQRIENIG LSWCSSSPLR IRLLKMLLTL IEVSIPGEAF QPSWTDFERK TWSSKLLSSS 1380 SAEDVLQILT LLENGIKRDF MWSNYETTYE LLACVNPPGS YTCHSSFPET VPVLPWIPLT 1440 TAAVALRLLE FDASLSYILQ QKAESQAQGS MDIKPLSDSA TAVISNDHVK EANLIYGGVG 1500 PSSSDYGQLG SKRGHGRIRG AKSHKRTNSM RPVSDKSTGN NRKILRQVLM WEDGQVEEQG 1560 GFRRGRRSAR SRQKSGRKIK FGSEGGHPEE TINETSKLSL DNSHEWNDDQ NIRMLQRSDG 1620 SPSISHRLIS IDNSGRVEYD DMLVDDRARS WQAGYLPTSR SYEMDEDRED DLSADGERGN 1680 TMDEEYKEYD LSDGGRGNVM DEERDLYVEH CTNGEYNEES NRNLEDNIVS DEEIQSASSD 1740 YSN

Sequence ? help Back to Top

Protein Sequence Length: 1743 aa Download sequence

MEVSSEGEKK PPPPVEATKI KRKMKTASQL EILEKAYMGE PYPSEALRAE LSVKLGLSDR  60
QLQMWFCHRR LKDRKPPPVK RPRMPSPTMT VAADVNPVGG SGEKNESTSG LGKGSNAYAH  120
PVDVRPGVAV ARIGLNLPSM NRFYESQQSI AELRAIALVE AQLGEALRED GPILGMEFDP  180
LPPGAFGAPI GVTAFSDDEK KTGQFFEVSK QRDIEQIEHH QMSGRTLHEY QFLPEQPTAK  240
SDEHERDISS YHYGTHANVH SISRTLPMAS GHSFLHGHEQ MSSSYCSQVQ MPNLNIVAQQ  300
SRRSHNLVSS MGEHDNSLCR SSLVNISMNP LYGTHSTSHP EFTSVLSDKR VVRGNNVVWI  360
EKKSKNDEAR IAREVEAHEK KMQKELEKQD ALRRKREEQI RKEMERHDRE RRREEERLLR  420
EKQKEEERCL REQRREMLRR EKFLHRESIR AERIRQKEAL RREREAARLK AANQRAAARQ  480
MAKESTELAE DERLELMELA VSSKGLPSIM SLDQETLENL ELFKDMRPNF PPESVQMKRP  540
FPDHPWIESE ANVGNLLMAW KFLVTFADVL GLWPFTLDEF LQAFHDHDSR LLGEVHIAVL  600
KCIIKDIEDV ARTSSIGLGF NQSSGANPGG GHLRIVEGAY AWGFDICSWQ QHLNPLTWPE  660
ILRQLALSGG LGPQQRKGGN AEPAHHDENE QGNDVADIIS NLRNGLAAEK AVAIMQERGF  720
SNQRKSRHRL TPGTVKFAAF HVLSLEGSKG LNIVEVANKI QKSGLRDLTT SRTPEASIAA  780
ALSRDSKLFE RTAPSTYCVR SPYRKDPGDA DAILSTARER IRTFKSGILD GDDAERDDGS  840
EVDVPEDAEV HDLGTGGNLT KEHQSPEVCP LDEMTSVASG NGCNEIRDIC KVGMENGGPY  900
TSILDIKGRV KGEESPPVEQ PIFISGICTG QYQEDSTSDE GDHGEPWVQG LTEGEYSDLS  960
IEERLNALCS LIGVALEGNS MRTILEERLE AANSLKKQML AEAQIDKRRV KEEYVLQIHD  1020
SLSVGNKSEF KTMSSLDATR LSAILNIGEE NREGPLDTGF QQEDCHSSHN NCPSDGLQVQ  1080
DVLVEADNSQ LQHSVVAVEK SRSQVKSYIG HKAEEMYVYR SLPLGQDRRR NRYWQFTSSA  1140
SRNEPGNGRI FVELHNGTWR LIDSAKGFDA LLASLDVRGI KESHLHLMLQ KLEKSFKTAT  1200
RGNILTDGQR TGEDAAGHHC NARNNGPSST VYADNHDGFE SSTSFRSEAE ETGSDTTESL  1260
KRYLDFESWM RRECFSLSVL SANKYGKKQG TQLLGIXRSY QFIYSENFHH CCSSILYFPE  1320
HMVQRIENIG LSWCSSSPLR IRLLKMLLTL IEVSIPGEAF QPSWTDFERK TWSSKLLSSS  1380
SAEDVLQILT LLENGIKRDF MWSNYETTYE LLACVNPPGS YTCHSSFPET VPVLPWIPLT  1440
TAAVALRLLE FDASLSYILQ QKAESQAQGS MDIKPLSDSA TAVISNDHVK EANLIYGGVG  1500
PSSSDYGQLG SKRGHGRIRG AKSHKRTNSM RPVSDKSTGN NRKILRQVLM WEDGQVEEQG  1560
GFRRGRRSAR SRQKSGRKIK FGSEGGHPEE TINETSKLSL DNSHEWNDDQ NIRMLQRSDG  1620
SPSISHRLIS IDNSGRVEYD DMLVDDRARS WQAGYLPTSR SYEMDEDRED DLSADGERGN  1680
TMDEEYKEYD LSDGGRGNVM DEERDLYVEH CTNGEYNEES NRNLEDNIVS DEEIQSASSD  1740
YSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	23	KKPPPPVEATKIKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein