PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022968161.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | Nin-like | ||||||||
Protein Properties | Length: 251aa MW: 29657.1 Da PI: 6.7086 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 78.9 | 5.5e-25 | 142 | 189 | 5 | 52 |
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + le+++k+F+ pi++AAk + v+lTvLKr+CR+++I+RWPhRk+ksl XP_022968161.1 142 LGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIMRWPHRKLKSL 189 789*******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEPSTKLHPH DFDFGWPYHQ HLFPFDHEAL ELPPLDVDGS FDFNSLSLPF HWDDISELES 60 EILSLDKHMI PVTPLYEEDM VAVDETKPER MVKLKDDDMS RELQEVTRMI ETGLSNWKEE 120 EEECEKRVRL IMRNGRRKSS VLGLEEIQKH FHIPITEAAK AMSVGLTVLK RRCRELNIMR 180 WPHRKLKSLN SLITNVQEMG LTNEIKGLEE HKRLVEELPN MDLTHRTRRL RQACFKANYK 240 KKRRSNVAVL H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 240 | 244 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 3e-39 | Nin-like family protein |