PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966800.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 441aa MW: 49278.4 Da PI: 8.5368

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129	1.7e-40	161	237	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls+ak+y+r+h+vCe hsk+p+v++ g+e+rfCqqCsrfh +s+fDe+krsCrrrL++hn+rrrk+q+ XP_022966800.1 161 CQVEGCNIDLSNAKDYYRKHRVCESHSKSPKVIIGGIERRFCQQCSRFHGVSDFDEKKRSCRRRLSNHNARRRKPQS 237 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MEWNARPSLQ WDWENLTVLN PRISGHGDIL HPANFENKHG INVGSSNSVG DARITGGPFF 60 ELGKTSPKNS QPVSQNSLSI EKSRTTKFTL EGFEPTLEDI DNKYEFVETS ICSCEQMLSL 120 KLGKQAYFEN TSAGNIKKPS VPLMESQATR KRCQNTPSSH CQVEGCNIDL SNAKDYYRKH 180 RVCESHSKSP KVIIGGIERR FCQQCSRFHG VSDFDEKKRS CRRRLSNHNA RRRKPQSKVI 240 SLNPARLSSW DFVERRQIDV FSDKLSLIYP ISHTNSAWES ELNSRHPQYG QYALKSGQAC 300 GSTGKLNISG NEMRCVHAMP YHNTSKLVTF KGPAIRVLDA AQDLQRALSL LSTDIKGPYE 360 ANLISSDSPN RLGNPDYANQ TATSQSPMDL GILSLPFASV DSGWPIESQV QVHHPSIEGN 420 GLLQDLQLFK TPCEIGMFSN S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MEWNARPSLQ WDWENLTVLN PRISGHGDIL HPANFENKHG INVGSSNSVG DARITGGPFF  60
ELGKTSPKNS QPVSQNSLSI EKSRTTKFTL EGFEPTLEDI DNKYEFVETS ICSCEQMLSL  120
KLGKQAYFEN TSAGNIKKPS VPLMESQATR KRCQNTPSSH CQVEGCNIDL SNAKDYYRKH  180
RVCESHSKSP KVIIGGIERR FCQQCSRFHG VSDFDEKKRS CRRRLSNHNA RRRKPQSKVI  240
SLNPARLSSW DFVERRQIDV FSDKLSLIYP ISHTNSAWES ELNSRHPQYG QYALKSGQAC  300
GSTGKLNISG NEMRCVHAMP YHNTSKLVTF KGPAIRVLDA AQDLQRALSL LSTDIKGPYE  360
ANLISSDSPN RLGNPDYANQ TATSQSPMDL GILSLPFASV DSGWPIESQV QVHHPSIEGN  420
GLLQDLQLFK TPCEIGMFSN S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	234	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	7e-44	SBP family protein