PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022966714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 467aa MW: 52458.1 Da PI: 5.2638 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 448.7 | 3.8e-137 | 45 | 461 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lLl+cA+ v+ g+ e+a+ L+++s+laspdgd+mqR+aayfteALa r+++s+++l kal++++ ++ ee+ a++lf+e++P+lk+++ XP_022966714.1 45 LIHLLLACANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHKALNSTKIL--SVPEEILAQRLFFELCPFLKLAY 137 689*************************************************************988887..59********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +++NqaI ea+ege+++HiiDf +++QW++Llq+L +Rp+gpp++RiTg+++ +ke le+++ rL++ Ae+ ++pf+f++ v+++le+l+ XP_022966714.1 138 VITNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHVRITGIHE----QKEVLEQMAVRLTEEAEKWDIPFQFTP-VVSKLENLD 227 ******************************************************....9**************************.799****** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll.......................................................desvsleserdevLkl 230 le+Lrvk+gEalaV++vl+lh++l + s+ + +++L++ XP_022966714.1 228 LESLRVKTGEALAVSSVLELHTILatdddktktspsasknlqkllrmkqrtlgewletdslqvfssspdsasvcspsglNPSQ----KMNSFLNA 318 *********************************************************************99999754444444....5566**** PP GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325 +++lsPkv+v++eqe+++n++ ++er+leal++y+alfd+le++++r s er+ vE++llg+ei+n++acegaerrerhe+lekW r+e++GF+ XP_022966714.1 319 LWGLSPKVMVITEQESNLNGSGLMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERRERHEKLEKWIVRFESVGFG 413 *********************************************************************************************** PP GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 v ls++ + ++ll+ + dgy+++ee+g l+++W+drpL+svSaW XP_022966714.1 414 RVGLSYNSMFLGNRLLQSNGYDGYKIKEENGFLFICWQDRPLFSVSAW 461 ************************************************ PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MFNGEGSSSV TSSPLQLFPW SLSPGIGSPY PFLRELKSEE RGLCLIHLLL ACANQVAIGN 60 IENANVGLEQ ISHLASPDGD TMQRIAAYFT EALADRILKS WPGLHKALNS TKILSVPEEI 120 LAQRLFFELC PFLKLAYVIT NQAIIEAMEG ERMIHIIDFK SCEPAQWINL LQTLKDRPDG 180 PPHVRITGIH EQKEVLEQMA VRLTEEAEKW DIPFQFTPVV SKLENLDLES LRVKTGEALA 240 VSSVLELHTI LATDDDKTKT SPSASKNLQK LLRMKQRTLG EWLETDSLQV FSSSPDSASV 300 CSPSGLNPSQ KMNSFLNALW GLSPKVMVIT EQESNLNGSG LMERVLEALN FYAALFDCLE 360 STVSRSSIER QRVEKMLLGE EIKNIIACEG AERRERHEKL EKWIVRFESV GFGRVGLSYN 420 SMFLGNRLLQ SNGYDGYKIK EENGFLFICW QDRPLFSVSA WGFQRQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |