PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022966687.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 269aa    MW: 29221.8 Da    PI: 7.0622
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022966687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016105127123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ C++ Fs++  L  H++ H
  XP_022966687.1 105 FSCNFCKREFSTSQALGGHQNAH 127
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MAEIEASSIS AVSGGDDGGI PVTVKLEKMV VDEIDGGDRQ SSQEPNSRQL LDLKLSNEES  60
GEGSPAILKR IVSASPPPPP PVTVDSSSSH GHANELCSNS KSRVFSCNFC KREFSTSQAL  120
GGHQNAHKQE RAMAKRCQGM ELGGGRPPYL ASYYPYTALS SHSFYGSSLG VRMDSMIHKP  180
SYRWLKSPGL QFHGSLASQP TVNNLRISAF QAQNGGFQLT TMMNNNVQST RRFDEGRAIL  240
IPNLNLSEPV LKIEHHVDDG HELDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.18e-20C2H2 family protein